C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like (endophilin) interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080728 Sgip1-004 ENSMUSG00000028524 10090 + 4:102760363-102971177 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungOvaryTestisENSMUST00000080728
Transcript ID Adipose Adrenal Brain Breast Colon Lung Ovary Testis
ENSMUST00000080728 0.218±0.07 0.445±0.04 9.860±0.00 0.190±0.03 0.587±0.03 0.907±0.04 0.130±0.04 1.891±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NS CIL_0002NS_0002 CGP 4:102087543-102973628
CIL_000262 CIL_000262_0002 CGP 4:102741297-103005594

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002021 ISS response to dietary excess
GO:0005515 IPI protein binding
GO:0005543 IDA phospholipid binding
GO:0005737 ISS cytoplasm
GO:0005886 IDA plasma membrane
GO:0005905 IEA coated pit
GO:0006897 IEA endocytosis
GO:0008017 IDA microtubule binding
GO:0015631 IPI tubulin binding
GO:0017124 IEA SH3 domain binding
GO:0030122 IDA AP-2 adaptor complex
GO:0030136 IDA clathrin-coated vesicle
GO:0048260 IMP positive regulation of receptor-mediated endocytosis
GO:0097320 IDA membrane tubulation
GO:2000253 ISS positive regulation of feeding behavior
GO:2000507 ISS positive regulation of energy homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237247 SGIP1-002 protein_coding Homo_sapiens 0 1890
ENST00000371037 SGIP1-001 protein_coding Homo_sapiens 0 2244
ENST00000371039 SGIP1-003 protein_coding Homo_sapiens 0 1890
ENST00000424320 SGIP1-006 protein_coding Homo_sapiens 0 1072
ENST00000435165 SGIP1-004 protein_coding Homo_sapiens 0 1890
ENST00000468286 SGIP1-007 processed_transcript Homo_sapiens 0 606
ENST00000480548 SGIP1-013 processed_transcript Homo_sapiens 0 425
ENST00000483060 SGIP1-010 processed_transcript Homo_sapiens 0 597
ENST00000484988 SGIP1-009 processed_transcript Homo_sapiens 3e-20 102
ENST00000487507 SGIP1-014 processed_transcript Homo_sapiens 0 468
ENST00000493564 SGIP1-005 processed_transcript Homo_sapiens 4e-39 165
ENST00000497055 SGIP1-008 processed_transcript Homo_sapiens 0 320

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