C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000262_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118473-ENSG00000152760 CGP 9606 1:66533383-66778787
GeneTranscriptPositionBiotype
ENSG00000118473 (SGIP1)
SH3-domain GRB2-like (endophilin) interacting protein 1 		ENST00000237247 (SGIP1-002) 66533383-66744374 protein_coding
ENST00000320161 (SGIP1-011) 66695051-66704509 processed_transcript
ENST00000371037 (SGIP1-001) 66534282-66748299 protein_coding
ENST00000371039 (SGIP1-003) 66533592-66745085 protein_coding
ENST00000424320 (SGIP1-006) 66533615-66679742 protein_coding
ENST00000435165 (SGIP1-004) 66694694-66745084 protein_coding
ENST00000468286 (SGIP1-007) 66534156-66677096 processed_transcript
ENST00000468570 (SGIP1-012) 66695433-66704757 processed_transcript
ENST00000480548 (SGIP1-013) 66670995-66690531 processed_transcript
ENST00000483060 (SGIP1-010) 66625848-66644012 processed_transcript
ENST00000484988 (SGIP1-009) 66615939-66626105 processed_transcript
ENST00000487507 (SGIP1-014) 66682294-66690531 processed_transcript
ENST00000493564 (SGIP1-005) 66533605-66626043 processed_transcript
ENST00000497055 (SGIP1-008) 66534181-66626060 processed_transcript
ENSG00000152760 (TCTEX1D1)
Tctex1 domain containing 1 		ENST00000282670 (TCTEX1D1-001) 66752460-66778787 protein_coding
ENST00000448074 (TCTEX1D1-006) 66775046-66775578 processed_transcript
ENST00000489510 (TCTEX1D1-003) 66776155-66777820 retained_intron
ENST00000491611 (TCTEX1D1-002) 66752532-66770507 processed_transcript
ENST00000525663 (TCTEX1D1-005) 66752459-66770896 retained_intron
ENST00000528352 (TCTEX1D1-004) 66752495-66777701 nonsense_mediated_decay
ENSG00000248458 (RP4-598P13.1)
 ENST00000502413 (RP4-598P13.1-001) 66665864-66677027 antisense
ENSG00000264720 (MIR3117)
microRNA 3117 		ENST00000584034 (MIR3117-201) 66628415-66628525 miRNA
CIL_000262_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028524-ENSMUSG00000028523 CGP 10090 4:102741297-103005594
GeneTranscriptPositionBiotype
ENSMUSG00000028523 (Tctex1d1)
Tctex1 domain containing 1 		ENSMUST00000030248 (Tctex1d1-001) 102986379-103004574 protein_coding
ENSMUST00000116317 (Tctex1d1-201) 102988573-103005594 protein_coding
ENSMUST00000125417 (Tctex1d1-004) 102986379-103002519 protein_coding
ENSMUST00000139883 (Tctex1d1-003) 102991822-102992887 processed_transcript
ENSMUST00000140654 (Tctex1d1-002) 102991784-103004292 protein_coding
ENSMUST00000169211 (Tctex1d1-202) 102991795-103005594 protein_coding
ENSMUSG00000028524 (Sgip1)
SH3-domain GRB2-like (endophilin) interacting protein 1 		ENSMUST00000066824 (Sgip1-001) 102760135-102971983 protein_coding
ENSMUST00000072481 (Sgip1-006) 102760345-102971863 protein_coding
ENSMUST00000080728 (Sgip1-004) 102760363-102971177 protein_coding
ENSMUST00000097948 (Sgip1-012) 102741297-102870826 protein_coding
ENSMUST00000106882 (Sgip1-007) 102760525-102973628 protein_coding
ENSMUST00000131431 (Sgip1-014) 102921295-102928739 processed_transcript
ENSMUST00000136164 (Sgip1-008) 102760355-102861152 processed_transcript
ENSMUST00000137592 (Sgip1-009) 102760328-102863716 processed_transcript
ENSMUST00000140289 (Sgip1-010) 102760375-102870121 processed_transcript
ENSMUST00000140676 (Sgip1-015) 102962356-102967914 processed_transcript
ENSMUST00000141624 (Sgip1-013) 102927190-102928912 processed_transcript
ENSMUST00000142430 (Sgip1-003) 102759222-102883347 processed_transcript
ENSMUST00000149547 (Sgip1-005) 102870564-102970603 protein_coding
ENSMUST00000156596 (Sgip1-011) 102760352-102869808 protein_coding
ENSMUST00000183855 (Sgip1-002) 102760465-102919120 nonsense_mediated_decay
ENSMUSG00000085041 (BB031773)
expressed sequence BB031773 		ENSMUST00000148892 (BB031773-001) 103004106-103011965 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000262_0001ENSG00000118473ENST00000237247ENST00000320161ENST00000371037ENST00000371039ENST00000424320ENST00000435165ENST00000468286ENST00000468570ENST00000480548ENST00000483060ENST00000484988ENST00000487507ENST00000493564ENST00000497055ENSG00000152760ENST00000282670ENST00000448074ENST00000489510ENST00000491611ENST00000525663ENST00000528352ENSG00000248458ENST00000502413ENSG00000264720ENST00000584034CIL_000262_0002ENSMUSG00000028523ENSMUST00000030248ENSMUST00000116317ENSMUST00000125417ENSMUST00000139883ENSMUST00000140654ENSMUST00000169211ENSMUSG00000028524ENSMUST00000066824ENSMUST00000072481ENSMUST00000080728ENSMUST00000097948ENSMUST00000106882ENSMUST00000131431ENSMUST00000136164ENSMUST00000137592ENSMUST00000140289ENSMUST00000140676ENSMUST00000141624ENSMUST00000142430ENSMUST00000149547ENSMUST00000156596ENSMUST00000183855ENSMUSG00000085041ENSMUST00000148892
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000262_0001ENSG00000118473ENST00000237247ENST00000371037ENST00000371039ENST00000424320ENST00000435165ENST00000468286ENST00000480548ENST00000483060ENSG00000152760ENST00000282670ENST00000448074ENST00000489510ENST00000525663ENST00000528352ENSG00000248458ENST00000502413ENSG00000264720ENST00000584034CIL_000262_0002ENSMUSG00000028523ENSMUST00000030248ENSMUST00000125417ENSMUST00000140654ENSMUST00000169211ENSMUSG00000028524ENSMUST00000066824ENSMUST00000072481ENSMUST00000080728ENSMUST00000106882ENSMUST00000131431ENSMUST00000140676ENSMUST00000141624ENSMUST00000142430ENSMUST00000149547ENSMUST00000156596ENSMUST00000183855ENSMUSG00000085041ENSMUST00000148892
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118473 ENST00000237247 N/A 0.436±0.00 N/A 2.970±0.29 N/A N/A 0.275±0.00 0.379±0.00 N/A 0.843±0.00 N/A N/A N/A N/A
ENST00000320161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371037 N/A N/A N/A N/A 0.257±0.19 N/A 0.145±0.00 N/A 0.085±0.00 N/A N/A 0.109±0.00 0.021±0.00 0.171±0.00
ENST00000371039 0.234±0.00 N/A N/A 2.723±0.00 0.156±0.00 0.528±0.00 0.272±0.00 0.241±0.00 0.038±0.00 0.818±0.00 0.138±0.00 0.232±0.04 0.087±0.03 0.653±0.00
ENST00000424320 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.515±0.00 N/A 0.544±0.00 0.121±0.00 N/A
ENST00000435165 N/A 0.312±0.00 0.495±0.00 N/A 1.027±0.00 N/A 0.391±0.00 0.295±0.18 N/A 0.824±0.00 N/A 0.253±0.15 N/A 0.768±0.00
ENST00000468286 N/A N/A 1.874±0.00 13.059±0.00 3.373±0.00 N/A N/A N/A N/A 3.338±0.00 0.267±0.00 0.706±0.06 N/A 2.271±0.00
ENST00000468570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480548 N/A N/A N/A N/A N/A N/A N/A N/A 1.266±0.00 N/A N/A N/A N/A N/A
ENST00000483060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.126±0.00 N/A N/A N/A
ENST00000484988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152760 ENST00000282670 0.105±0.00 N/A N/A 0.684±0.08 0.039±0.00 0.167±0.00 0.168±0.13 0.119±0.08 N/A 1.190±0.00 N/A 0.348±0.22 1.495±0.20 0.026±0.00
ENST00000448074 N/A N/A N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A 6.181±0.00 N/A N/A 0.167±0.00
ENST00000489510 N/A N/A N/A N/A 0.074±0.00 0.513±0.00 N/A 1.411±0.00 N/A 0.586±0.00 N/A 0.093±0.03 0.329±0.00 N/A
ENST00000491611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525663 N/A N/A N/A N/A N/A 0.403±0.00 0.291±0.00 1.054±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528352 0.333±0.00 N/A N/A N/A N/A N/A 0.234±0.00 0.150±0.00 N/A 1.237±0.00 N/A N/A 0.411±0.00 0.057±0.00
ENSG00000248458 ENST00000502413 0.603±0.00 1.999±0.00 N/A N/A 0.908±0.00 0.564±0.02 0.831±0.00 0.594±0.39 0.446±0.01 N/A 0.253±0.00 0.745±0.31 0.223±0.14 1.862±0.50
ENSG00000264720 ENST00000584034 0.722±0.00 0.366±0.00 N/A N/A 1.075±0.00 N/A N/A N/A N/A N/A N/A 0.598±0.00 N/A 0.329±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028523 ENSMUST00000030248 0.036±0.00 N/A N/A N/A N/A 0.087±0.00 0.064±0.03 0.116±0.02 N/A N/A N/A 0.039±0.00 N/A 130.896±6.01
ENSMUST00000116317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125417 0.202±0.00 N/A N/A N/A N/A 0.229±0.00 0.157±0.12 0.122±0.00 0.103±0.00 N/A N/A N/A N/A 176.991±43.61
ENSMUST00000139883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140654 N/A N/A 0.064±0.00 N/A N/A 0.169±0.05 N/A N/A 0.059±0.01 N/A N/A 0.366±0.31 0.011±0.00 14.183±0.00
ENSMUST00000169211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A
ENSMUSG00000028524 ENSMUST00000066824 N/A N/A N/A 4.804±1.53 N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A
ENSMUST00000072481 0.153±0.00 N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 0.999±0.00 N/A 0.087±0.00 N/A N/A
ENSMUST00000080728 0.218±0.07 0.445±0.04 N/A 9.860±0.00 0.190±0.03 0.587±0.03 N/A N/A N/A 0.907±0.04 N/A 0.130±0.04 N/A 1.891±0.14
ENSMUST00000097948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106882 0.081±0.00 0.204±0.00 0.242±0.00 N/A 0.139±0.00 0.308±0.12 N/A N/A N/A 0.609±0.15 0.129±0.01 N/A N/A N/A
ENSMUST00000131431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.231±0.00 N/A N/A
ENSMUST00000136164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.682±0.05 N/A N/A
ENSMUST00000141624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A
ENSMUST00000142430 0.760±0.42 0.764±0.26 2.701±0.00 10.654±7.41 1.181±0.00 1.016±0.30 0.369±0.00 1.855±1.37 1.496±0.98 1.972±1.19 1.031±0.51 1.113±1.71 N/A 1.219±0.19
ENSMUST00000149547 0.526±0.29 N/A N/A 31.393±0.00 0.312±0.00 0.410±0.00 N/A 0.406±0.00 N/A 1.106±0.09 N/A 0.314±0.00 N/A 1.274±0.33
ENSMUST00000156596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 57.560±0.00
ENSMUST00000183855 N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A 2.582±0.45
ENSMUSG00000085041 ENSMUST00000148892 N/A N/A 0.017±0.01 0.107±0.01 N/A 0.042±0.01 0.015±0.00 N/A 0.008±0.01 N/A N/A 0.059±0.02 0.011±0.01 4.101±0.78

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