C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribulose-5-phosphate-3-epimerase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000435437  |
RPE-004 |
ENSG00000197713 |
9606 | + |
2:210002657-210019961  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006P1 | CIL_0006P1_0001 | CGP | 2:209771993-210022259 |
| CIL_0006P6 | CIL_0006P6_0001 | CGP | 2:210002565-210171383 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003824 | IEA | catalytic activity |
| GO:0004750 | IEA | ribulose-phosphate 3-epimerase activity |
| GO:0005975 | IEA | carbohydrate metabolic process |
| GO:0006098 | IEA | pentose-phosphate shunt |
| GO:0008152 | IEA | metabolic process |
| GO:0016857 | IEA | racemase and epimerase activity, acting on carbohydrates and derivatives |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000027157
|
Rpe-001 | protein_coding | Mus_musculus | 0 | 1040 |
|
ENSMUST00000113995
|
Rpe-002 | protein_coding | Mus_musculus | 0 | 931 |
|
ENSMUST00000142920
|
Rpe-003 | nonsense_mediated_decay | Mus_musculus | 0 | 876 |
|
ENSMUST00000190404
|
Rpe-005 | nonsense_mediated_decay | Mus_musculus | 0 | 752 |
|
ENSMUST00000151016
|
Rpe-004 | nonsense_mediated_decay | Mus_musculus | 2e-39 | 167 |
