C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribulose-5-phosphate-3-epimerase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151016 Rpe-004 ENSMUSG00000026005 10090 + 1:66700831-66715194 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENSMUST00000151016
Transcript ID Adrenal Breast Colon Lung Ovary
ENSMUST00000151016 7.843±1.96 6.226±0.09 2.829±0.82 4.882±0.36 5.185±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006P1 CIL_0006P1_0002 CGP 1:66468367-66719805
CIL_0006P6 CIL_0006P6_0002 CGP 1:66700831-66817562

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354506 RPE-201 protein_coding Homo_sapiens 7.00649e-44 183
ENST00000359429 RPE-001 protein_coding Homo_sapiens 6.02558e-44 183
ENST00000408981 RPE-010 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000411934 RPE-005 protein_coding Homo_sapiens 6e-34 148
ENST00000429907 RPE-011 protein_coding Homo_sapiens 2e-39 167
ENST00000429921 RPE-003 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000435437 RPE-004 protein_coding Homo_sapiens 2e-39 167
ENST00000436630 RPE-008 protein_coding Homo_sapiens 1.96182e-44 183
ENST00000438191 RPE-006 nonsense_mediated_decay Homo_sapiens 3.9937e-43 178
ENST00000438204 RPE-016 protein_coding Homo_sapiens 6e-39 165
ENST00000438265 RPE-007 protein_coding Homo_sapiens 1e-39 167
ENST00000441178 RPEL1-001 protein_coding Homo_sapiens 8e-37 159
ENST00000441588 RPE-014 protein_coding Homo_sapiens 1e-39 167
ENST00000445268 RPE-013 protein_coding Homo_sapiens 5e-39 165
ENST00000452025 RPE-012 protein_coding Homo_sapiens 2e-39 167
ENST00000453724 RPE-009 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000454822 RPE-002 protein_coding Homo_sapiens 4.00001e-40 171

Loading