C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calsyntenin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435891 CLSTN1-003 ENSG00000171603 9606 - 1:9729028-9751581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435891 19.744±0.00 19.616±0.00 3.569±0.00 82.029±0.00 20.053±0.00 18.584±0.00 6.591±0.00 14.940±14.10 2.853±0.00 18.396±0.00 7.902±0.00 34.535±9.01 36.321±0.82 24.668±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105691 Clstn1-001 protein_coding Mus_musculus 0 1507
ENSMUST00000039144 Clstn1-002 protein_coding Mus_musculus 0 1450
ENSMUST00000151895 Clstn1-004 retained_intron Mus_musculus 0 472

Loading