C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tandem C2 domains, nuclear
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435962 TC2N-001 ENSG00000165929 9606 - 14:91779751-91867529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000435962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000435962 0.942±0.00 1.232±0.00 0.696±0.00 0.617±0.00 1.722±0.40 4.410±2.01 0.561±0.00 0.355±0.00 3.471±0.00 5.094±1.72 0.251±0.00 0.409±0.00 1.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707
CIL_000538 CIL_000538_0001 CGP 14:91580696-91867536
CIL_00061L CIL_00061L_0002 CGP 14:91779751-91947987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0010468 IMP regulation of gene expression
GO:0030193 IMP regulation of blood coagulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110047 Tc2n-002 nonsense_mediated_decay Mus_musculus 0 1857
ENSMUST00000162735 Tc2n-001 protein_coding Mus_musculus 0 1857
ENSMUST00000160830 Tc2n-003 protein_coding Mus_musculus 0 1832
ENSMUST00000160715 Tc2n-004 protein_coding Mus_musculus 0 1020

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