C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paroxysmal nonkinesigenic dyskinesia
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436005 PNKD-007 ENSG00000127838 9606 + 2:218334703-218344981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryENST00000436005
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary
ENST00000436005 7.164±0.00 1.684±0.00 0.979±0.00 8.139±0.00 1.234±0.00 2.507±0.00 6.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VJ CIL_0005VJ_0001 CGP 2:218264123-218346793
CIL_0005VI CIL_0005VI_0001 CGP 2:218270392-218346793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004416 IEA hydroxyacylglutathione hydrolase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006750 IEA glutathione biosynthetic process
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027370 Pnkd-001 protein_coding Mus_musculus 0 1221
ENSMUST00000087225 Pnkd-004 protein_coding Mus_musculus 0 1218
ENSMUST00000087226 Pnkd-002 protein_coding Mus_musculus 0 1216

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