C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paroxysmal nonkinesiogenic dyskinesia
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087225 Pnkd-004 ENSMUSG00000026179 10090 + 1:74332610-74353686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087225
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087225 8.051±2.92 3.723±0.32 2.969±0.55 7.427±2.69 7.124±2.50 1.465±0.20 9.903±2.23 11.925±1.64 22.113±13.09 9.928±0.41 2.613±0.86 6.708±2.35 1.699±0.86 14.865±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005VJ CIL_0005VJ_0002 CGP 1:74279840-74353694
CIL_0005VI CIL_0005VI_0002 CGP 1:74284930-74353694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004416 IEA hydroxyacylglutathione hydrolase activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006750 IEA glutathione biosynthetic process
GO:0008270 IEA zinc ion binding
GO:0016020 ISO membrane
GO:0032225 IMP regulation of synaptic transmission, dopaminergic
GO:0042053 IMP regulation of dopamine metabolic process
GO:0050884 IMP neuromuscular process controlling posture

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258362 PNKD-002 protein_coding Homo_sapiens 0 1378
ENST00000273077 PNKD-001 protein_coding Homo_sapiens 0 1242
ENST00000421952 DDN-001 protein_coding Homo_sapiens 0.0000001 64
ENST00000436005 PNKD-007 protein_coding Homo_sapiens 0 1218
ENST00000483797 PNKD-008 retained_intron Homo_sapiens 3e-27 124

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