C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127838-ENSG00000127838 CGP 9606 2:218270392-218346793
GeneTranscriptPositionBiotype
ENSG00000127838 (PNKD)
paroxysmal nonkinesigenic dyskinesia 		ENST00000248451 (PNKD-003) 218270392-218272947 protein_coding
ENST00000258362 (PNKD-002) 218323173-218346791 protein_coding
ENST00000273077 (PNKD-001) 218270485-218346793 protein_coding
ENST00000436005 (PNKD-007) 218334703-218344981 protein_coding
ENST00000469689 (PNKD-004) 218270520-218272911 retained_intron
ENST00000472650 (PNKD-005) 218271380-218318256 processed_transcript
ENST00000483797 (PNKD-008) 218340095-218340889 retained_intron
ENST00000494954 (PNKD-006) 218316728-218318008 processed_transcript
ENSG00000135926 (TMBIM1)
transmembrane BAX inhibitor motif containing 1 		ENST00000258412 (TMBIM1-001) 218274192-218292577 protein_coding
ENST00000396809 (TMBIM1-201) 218274201-218285934 protein_coding
ENST00000413976 (TMBIM1-013) 218282004-218292513 protein_coding
ENST00000418569 (TMBIM1-016) 218278536-218287303 protein_coding
ENST00000420341 (TMBIM1-010) 218282118-218292534 protein_coding
ENST00000425694 (TMBIM1-020) 218277946-218282208 protein_coding
ENST00000429501 (TMBIM1-015) 218277935-218290089 protein_coding
ENST00000434015 (TMBIM1-012) 218281940-218292529 protein_coding
ENST00000437694 (TMBIM1-004) 218275432-218292503 nonsense_mediated_decay
ENST00000439306 (TMBIM1-023) 218277363-218282181 nonsense_mediated_decay
ENST00000440422 (TMBIM1-007) 218279335-218292586 protein_coding
ENST00000444000 (TMBIM1-017) 218280059-218287291 protein_coding
ENST00000444183 (TMBIM1-009) 218279338-218292534 protein_coding
ENST00000444881 (TMBIM1-003) 218274201-218286849 protein_coding
ENST00000445635 (TMBIM1-002) 218275006-218292513 protein_coding
ENST00000451181 (TMBIM1-019) 218280110-218289994 protein_coding
ENST00000453281 (TMBIM1-011) 218280077-218292535 protein_coding
ENST00000453776 (TMBIM1-018) 218280054-218286008 protein_coding
ENST00000465082 (TMBIM1-006) 218274201-218280992 retained_intron
ENST00000466012 (TMBIM1-008) 218277935-218292535 retained_intron
ENST00000476429 (TMBIM1-021) 218278409-218279539 retained_intron
ENST00000492966 (TMBIM1-022) 218277801-218280081 retained_intron
ENST00000495113 (TMBIM1-014) 218278479-218292512 retained_intron
ENSG00000237281 (CATIP-AS2)
CATIP antisense RNA 2 		ENST00000411433 (CATIP-AS2-001) 218326889-218357966 antisense
CIL_0005VI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026179-ENSMUSG00000026179 CGP 10090 1:74284930-74353694
GeneTranscriptPositionBiotype
ENSMUSG00000006301 (Tmbim1)
transmembrane BAX inhibitor motif containing 1 		ENSMUST00000016309 (Tmbim1-001) 74288247-74304405 protein_coding
ENSMUST00000113796 (Tmbim1-002) 74288253-74304361 protein_coding
ENSMUST00000128505 (Tmbim1-008) 74289300-74291228 protein_coding
ENSMUST00000130763 (Tmbim1-006) 74293910-74305622 protein_coding
ENSMUST00000135384 (Tmbim1-003) 74288251-74304351 retained_intron
ENSMUST00000141560 (Tmbim1-005) 74293927-74304120 protein_coding
ENSMUST00000152603 (Tmbim1-004) 74288251-74295695 retained_intron
ENSMUST00000154859 (Tmbim1-007) 74293562-74304215 processed_transcript
ENSMUSG00000026179 (Pnkd)
paroxysmal nonkinesiogenic dyskinesia 		ENSMUST00000027370 (Pnkd-001) 74285045-74353684 protein_coding
ENSMUST00000087225 (Pnkd-004) 74332610-74353686 protein_coding
ENSMUST00000087226 (Pnkd-002) 74285055-74353694 protein_coding
ENSMUST00000113805 (Pnkd-003) 74284930-74287454 protein_coding
ENSMUST00000129219 (Pnkd-005) 74285050-74286634 retained_intron
ENSMUST00000138620 (Pnkd-007) 74285054-74347566 retained_intron
ENSMUST00000152492 (Pnkd-006) 74285777-74287273 retained_intron
ENSMUST00000190398 (Pnkd-008) 74332663-74336261 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VI_0001ENSG00000127838ENST00000248451ENST00000258362ENST00000273077ENST00000436005ENST00000469689ENSG00000135926ENST00000258412ENST00000396809ENST00000437694ENST00000445635ENSG00000237281ENST00000411433CIL_0005VI_0002ENSMUSG00000006301ENSMUST00000016309ENSMUST00000113796ENSMUST00000135384ENSMUST00000152603ENSMUST00000154859ENSMUSG00000026179ENSMUST00000027370ENSMUST00000087225ENSMUST00000087226ENSMUST00000113805ENSMUST00000129219ENSMUST00000138620ENSMUST00000152492
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127838 ENST00000248451 18.942±0.00 35.548±0.00 3.726±0.00 29.305±18.73 29.547±27.62 29.704±26.07 19.188±15.45 30.741±26.69 2.726±0.00 17.051±14.48 8.905±2.61 25.145±16.31 35.445±6.80 33.448±14.54
ENST00000258362 3.682±0.00 11.823±0.00 0.716±0.00 5.840±2.55 2.343±0.00 1.599±0.00 2.758±0.00 5.696±4.77 38.070±37.72 3.062±1.92 N/A 19.111±12.87 19.243±4.34 13.150±2.18
ENST00000273077 N/A N/A N/A 15.930±0.00 N/A N/A 0.177±0.00 N/A N/A N/A 0.327±0.00 N/A N/A N/A
ENST00000436005 N/A N/A 7.164±0.00 N/A 1.684±0.00 0.979±0.00 N/A 8.139±0.00 1.234±0.00 2.507±0.00 N/A 6.347±0.00 N/A N/A
ENST00000469689 N/A N/A N/A N/A N/A 0.641±0.00 0.367±0.00 N/A 0.931±0.00 N/A N/A N/A N/A N/A
ENST00000472650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135926 ENST00000258412 123.877±0.00 13.442±0.00 3.872±0.00 7.121±0.00 26.451±19.94 19.039±9.46 11.362±5.88 15.227±9.54 41.857±27.26 22.992±16.14 20.049±7.70 40.234±26.94 108.612±17.00 14.185±2.47
ENST00000396809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.890±0.00
ENST00000413976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437694 N/A N/A 5.740±0.00 5.943±0.00 N/A N/A N/A N/A N/A N/A 16.630±0.00 10.727±0.00 N/A N/A
ENST00000439306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445635 N/A N/A 7.171±0.00 N/A 13.606±0.00 20.409±0.00 10.323±0.00 N/A 15.019±0.00 14.729±0.00 N/A 10.953±0.00 N/A N/A
ENST00000451181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237281 ENST00000411433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.268±0.00 0.499±0.05 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006301 ENSMUST00000016309 33.966±9.74 28.119±1.15 23.829±11.88 1.259±0.45 32.999±8.05 52.300±17.08 18.332±3.41 11.868±0.41 9.995±4.15 67.333±2.50 19.521±2.16 22.824±5.59 17.385±7.65 1.255±0.56
ENSMUST00000113796 N/A N/A N/A 0.154±0.02 N/A N/A N/A N/A 0.403±0.09 N/A N/A 0.804±0.31 N/A 0.134±0.04
ENSMUST00000128505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135384 N/A N/A N/A 0.278±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.254±0.17
ENSMUST00000141560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152603 N/A N/A 6.661±0.32 0.402±0.13 N/A N/A N/A N/A 0.960±0.00 N/A N/A 3.431±0.15 N/A N/A
ENSMUST00000154859 58.158±13.59 170.966±14.95 N/A N/A 81.951±4.47 159.396±33.42 34.401±1.34 22.668±6.42 20.862±4.93 133.330±13.88 N/A 54.745±10.32 N/A N/A
ENSMUSG00000026179 ENSMUST00000027370 N/A N/A N/A 15.099±3.54 N/A N/A N/A N/A N/A N/A 1.564±0.40 2.351±0.81 3.420±1.70 N/A
ENSMUST00000087225 8.051±2.92 3.723±0.32 2.969±0.55 7.427±2.69 7.124±2.50 1.465±0.20 9.903±2.23 11.925±1.64 22.113±13.09 9.928±0.41 2.613±0.86 6.708±2.35 1.699±0.86 14.865±0.75
ENSMUST00000087226 N/A N/A 2.178±0.29 N/A N/A 1.488±0.00 N/A 2.256±0.00 0.820±0.28 N/A 2.739±1.26 3.540±2.04 3.029±1.26 2.195±0.00
ENSMUST00000113805 31.617±8.13 40.035±5.98 22.749±2.09 14.663±0.00 23.503±2.65 27.794±3.12 35.823±6.78 59.783±7.98 21.365±5.05 19.105±0.75 22.354±2.66 21.764±3.72 16.148±5.89 34.401±15.46
ENSMUST00000129219 N/A 25.906±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138620 N/A 30.449±9.83 N/A N/A N/A 16.334±4.59 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152492 N/A 31.973±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.612±0.00 25.613±4.60 22.236±0.00
ENSMUST00000190398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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