C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 852
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436261 ZNF852-001 ENSG00000178917 9606 - 3:44498970-44510636 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartLungMusclePlacentaTestisENST00000436261
Transcript ID Adipose Adrenal Breast Heart Lung Muscle Placenta Testis
ENST00000436261 0.507±0.00 0.542±0.00 0.296±0.00 0.089±0.00 0.357±0.00 0.554±0.00 0.112±0.06 0.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041R CIL_00041R_0002 CGP 3:44498970-44583483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063980 Zkscan7-201 protein_coding Mus_musculus 0 1123
ENSMUST00000060762 Zfp397-201 protein_coding Mus_musculus 0 195
ENSMUST00000060444 Zfp3-001 protein_coding Mus_musculus 9e-36 156
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 2e-27 128
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 2e-27 128
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 2e-27 128
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 3e-26 124
ENSMUST00000186475 protein_coding Mus_musculus 1e-24 119
ENSMUST00000187028 nonsense_mediated_decay Mus_musculus 1e-24 119
ENSMUST00000121178 Gm14229-001 processed_pseudogene Mus_musculus 2e-23 115
ENSMUST00000165956 D3Ertd254e-201 protein_coding Mus_musculus 0.000000000000004 88
ENSMUST00000130272 Zfp420-005 retained_intron Mus_musculus 0.0000000000002 82
ENSMUST00000174558 Gm2381-001 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000054780 Zfp959-001 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000099439 Gm4767-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000188096 Gm4767-001 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000105315 Gm10778-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000189672 Gm10778-001 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0.0000008 60

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