C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437151 RPL7P29-001 ENSG00000214457 9606 + 6:86970466-86971193 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLungMuscleOvaryENST00000437151
Transcript ID Adrenal Brain Breast Heart Lung Muscle Ovary
ENST00000437151 0.017±0.00 0.205±0.17 0.050±0.00 0.185±0.00 0.047±0.00 0.015±0.00 0.089±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BO CIL_0006BO_0002 CGP 6:85607785-87016683

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 569
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 518
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 381
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 339
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 337
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 241
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 241

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