C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor-related protein 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437977 LRP1B-003 ENSG00000168702 9606 - 2:140231772-140358068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000437977
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000437977 1.024±0.00 0.005±0.00 0.448±0.14 0.425±0.00 0.060±0.00 0.082±0.00 0.009±0.00 0.112±0.00 1.200±0.60 0.023±0.00 0.009±0.00 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NW CIL_0003NW_0001 CGP 2:140231423-143055832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142546 Lrp1b-002 protein_coding Mus_musculus 0 3216
ENSMUST00000052550 Lrp1b-001 protein_coding Mus_musculus 0 2569
ENSMUST00000185258 Lrp1b-202 protein_coding Mus_musculus 0 979
ENSMUST00000134032 Lrp1b-004 retained_intron Mus_musculus 0 599
ENSMUST00000129974 Lrp1b-003 processed_transcript Mus_musculus 0 590

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