C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003NW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168702-ENSG00000115919 CGP 9606 2:140231423-143055832
GeneTranscriptPositionBiotype
ENSG00000115919 (KYNU)
kynureninase 		ENST00000264170 (KYNU-001) 142877498-143055832 protein_coding
ENST00000375773 (KYNU-003) 142877657-142990052 protein_coding
ENST00000409512 (KYNU-002) 142877664-143042172 protein_coding
ENST00000410015 (KYNU-004) 142877666-142947421 protein_coding
ENST00000424385 (KYNU-005) 142877684-142954871 nonsense_mediated_decay
ENST00000460143 (KYNU-006) 142918679-142958075 retained_intron
ENST00000612147 (KYNU-008) 142918679-142967494 protein_coding
ENST00000613664 (KYNU-009) 142927659-142971393 protein_coding
ENST00000621320 (KYNU-007) 142885395-142964752 protein_coding
ENSG00000168702 (LRP1B)
low density lipoprotein receptor-related protein 1B 		ENST00000389484 (LRP1B-001) 140231423-142131701 protein_coding
ENST00000434794 (LRP1B-002) 140850131-142131005 protein_coding
ENST00000437977 (LRP1B-003) 140231772-140358068 protein_coding
ENST00000442974 (LRP1B-005) 140238182-140297969 protein_coding
ENST00000486364 (LRP1B-004) 141805364-141810401 processed_transcript
ENST00000618808 (LRP1B-201) 140238151-141254642 protein_coding
ENSG00000229781 (AC013444.1)
 ENST00000428909 (AC013444.1-001) 142854095-142855998 processed_pseudogene
ENSG00000236440 (AC117947.1)
 ENST00000427448 (AC117947.1-001) 140683360-140683888 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003NW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049252-ENSMUSG00000026866 CGP 10090 2:40595248-43682715
GeneTranscriptPositionBiotype
ENSMUSG00000026866 (Kynu)
kynureninase (L-kynurenine hydrolase) 		ENSMUST00000028223 (Kynu-001) 43555329-43682715 protein_coding
ENSMUST00000050511 (Kynu-003) 43555354-43636758 protein_coding
ENSMUST00000112826 (Kynu-002) 43555342-43680216 protein_coding
ENSMUST00000130968 (Kynu-005) 43599615-43606198 processed_transcript
ENSMUST00000138540 (Kynu-004) 43555329-43563496 processed_transcript
ENSMUST00000148855 (Kynu-006) 43670930-43681423 processed_transcript
ENSMUSG00000049252 (Lrp1b)
low density lipoprotein-related protein 1B (deleted in tumors) 		ENSMUST00000052550 (Lrp1b-001) 40595248-42653598 protein_coding
ENSMUST00000129974 (Lrp1b-003) 40596876-40615251 processed_transcript
ENSMUST00000133104 (Lrp1b-006) 42321692-42653256 retained_intron
ENSMUST00000134032 (Lrp1b-004) 40677516-40699776 retained_intron
ENSMUST00000138700 (Lrp1b-007) 41496148-42653256 retained_intron
ENSMUST00000142546 (Lrp1b-002) 40595248-40702800 protein_coding
ENSMUST00000142688 (Lrp1b-005) 42649878-42653015 processed_transcript
ENSMUST00000167270 (Lrp1b-201) 40801393-41789078 protein_coding
ENSMUST00000185258 (Lrp1b-202) 40595534-40627336 protein_coding
ENSMUSG00000080994 (Gm13464)
predicted gene 13464 		ENSMUST00000119418 (Gm13464-001) 43518464-43519398 processed_pseudogene
ENSMUSG00000081085 (Gm13463)
predicted gene 13463 		ENSMUST00000119020 (Gm13463-001) 42124621-42124853 processed_pseudogene
ENSMUSG00000081999 (Gm13461)
predicted gene 13461 		ENSMUST00000120980 (Gm13461-001) 41987473-41988829 processed_pseudogene
ENSMUSG00000082930 (Gm13462)
predicted gene 13462 		ENSMUST00000121472 (Gm13462-001) 40958391-40959351 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NW_0001ENSG00000115919ENST00000264170ENST00000375773ENST00000409512ENST00000410015ENST00000424385ENST00000460143ENST00000612147ENST00000613664ENST00000621320ENSG00000168702ENST00000389484ENST00000434794ENST00000437977ENST00000442974ENST00000486364ENST00000618808ENSG00000229781ENST00000428909ENSG00000236440ENST00000427448CIL_0003NW_0002ENSMUSG00000026866ENSMUST00000028223ENSMUST00000050511ENSMUST00000112826ENSMUST00000130968ENSMUST00000138540ENSMUST00000148855ENSMUSG00000049252ENSMUST00000052550ENSMUST00000129974ENSMUST00000133104ENSMUST00000134032ENSMUST00000138700ENSMUST00000142546ENSMUST00000142688ENSMUST00000167270ENSMUST00000185258ENSMUSG00000080994ENSMUST00000119418ENSMUSG00000081085ENSMUST00000119020ENSMUSG00000081999ENSMUST00000120980ENSMUSG00000082930ENSMUST00000121472
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NW_0001ENSG00000115919ENST00000264170ENST00000375773ENST00000409512ENST00000410015ENST00000613664ENST00000621320ENSG00000168702ENST00000389484ENST00000434794ENST00000437977ENST00000442974ENST00000618808ENSG00000229781ENST00000428909ENSG00000236440ENST00000427448CIL_0003NW_0002ENSMUSG00000026866ENSMUST00000028223ENSMUST00000050511ENSMUST00000112826ENSMUST00000130968ENSMUST00000138540ENSMUST00000148855ENSMUSG00000049252ENSMUST00000052550ENSMUST00000129974ENSMUST00000133104ENSMUST00000134032ENSMUST00000138700ENSMUST00000142546ENSMUST00000142688ENSMUST00000167270ENSMUST00000185258ENSMUSG00000080994ENSMUST00000119418ENSMUSG00000081085ENSMUST00000119020ENSMUSG00000081999ENSMUST00000120980ENSMUSG00000082930ENSMUST00000121472
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115919 ENST00000264170 0.239±0.00 0.402±0.00 0.209±0.00 0.118±0.11 0.187±0.01 0.079±0.05 0.097±0.06 0.684±0.44 0.434±0.00 0.297±0.17 0.047±0.00 0.050±0.03 0.081±0.03 0.282±0.02
ENST00000375773 N/A N/A 1.044±0.00 0.024±0.00 0.553±0.00 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000409512 2.735±0.00 1.891±0.00 0.528±0.00 0.058±0.00 1.645±0.00 0.330±0.00 N/A 3.569±0.51 11.795±0.00 5.213±0.24 N/A 0.749±0.29 2.198±0.74 4.858±0.83
ENST00000410015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.455±0.00 N/A N/A
ENST00000424385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613664 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A 1.032±0.00 N/A N/A N/A
ENST00000621320 N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A 0.570±0.00 N/A
ENSG00000168702 ENST00000389484 0.085±0.00 N/A N/A 2.336±0.80 N/A 0.036±0.00 N/A 0.048±0.02 N/A N/A 0.425±0.29 N/A 0.009±0.00 0.052±0.02
ENST00000434794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A
ENST00000437977 1.024±0.00 0.005±0.00 N/A N/A 0.448±0.14 0.425±0.00 0.060±0.00 0.082±0.00 0.009±0.00 0.112±0.00 1.200±0.60 0.023±0.00 0.009±0.00 0.041±0.00
ENST00000442974 N/A N/A N/A N/A N/A N/A N/A 0.359±0.00 N/A N/A N/A N/A 0.043±0.00 N/A
ENST00000486364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618808 N/A N/A 0.273±0.00 3.067±0.00 N/A 0.278±0.00 N/A 0.061±0.00 N/A N/A 0.365±0.00 0.044±0.00 0.003±0.00 0.051±0.00
ENSG00000229781 ENST00000428909 N/A 0.057±0.00 N/A N/A 0.051±0.05 0.127±0.00 0.090±0.00 0.033±0.00 N/A 0.017±0.00 N/A N/A N/A 0.061±0.05
ENSG00000236440 ENST00000427448 N/A 0.036±0.00 N/A 0.274±0.00 N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A 0.043±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026866 ENSMUST00000028223 0.059±0.05 0.073±0.02 0.050±0.03 0.036±0.02 0.979±0.35 0.255±0.21 0.081±0.04 5.504±2.56 23.625±23.12 0.518±0.13 0.095±0.00 0.095±0.05 1.075±0.90 0.015±0.00
ENSMUST00000050511 N/A N/A N/A 0.008±0.00 N/A N/A 0.012±0.00 N/A N/A 0.093±0.01 N/A N/A N/A N/A
ENSMUST00000112826 0.107±0.08 N/A 0.051±0.02 0.036±0.00 N/A N/A N/A N/A 0.939±0.26 0.384±0.00 0.092±0.00 0.080±0.00 1.655±0.00 N/A
ENSMUST00000130968 N/A 0.100±0.02 N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.316±0.00 N/A N/A
ENSMUST00000148855 N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A 0.034±0.00 N/A 0.036±0.00 N/A
ENSMUSG00000049252 ENSMUST00000052550 N/A 0.008±0.00 N/A 1.592±1.65 N/A N/A N/A N/A 0.002±0.00 N/A N/A 0.005±0.00 0.002±0.00 0.025±0.02
ENSMUST00000129974 0.080±0.01 N/A 0.026±0.00 32.585±0.00 0.174±0.12 0.177±0.00 0.125±0.00 0.108±0.06 0.031±0.01 0.121±0.02 N/A 0.527±0.29 0.487±0.25 0.626±0.00
ENSMUST00000133104 0.022±0.00 0.328±0.20 N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A 0.106±0.00 N/A 0.110±0.00
ENSMUST00000134032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 0.072±0.00 0.229±0.00
ENSMUST00000138700 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A 0.006±0.00 0.060±0.00
ENSMUST00000142546 N/A 0.126±0.07 0.008±0.00 0.628±0.15 N/A N/A 0.018±0.01 N/A 0.001±0.00 N/A N/A 0.082±0.02 0.007±0.00 0.065±0.00
ENSMUST00000142688 N/A 0.099±0.00 0.005±0.00 N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A 0.006±0.00 N/A
ENSMUST00000167270 0.017±0.00 0.039±0.02 N/A N/A N/A 0.015±0.00 0.022±0.01 0.004±0.00 0.001±0.00 N/A 0.003±0.00 0.003±0.00 0.003±0.00 N/A
ENSMUST00000185258 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.086±0.10 N/A N/A
ENSMUSG00000080994 ENSMUST00000119418 0.321±0.12 0.247±0.10 0.119±0.05 2.551±3.35 0.378±0.28 0.088±0.03 0.315±0.12 0.259±0.08 3.063±6.61 0.071±0.05 0.835±0.39 0.224±0.22 0.200±0.11 0.046±0.02
ENSMUSG00000081085 ENSMUST00000119020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.894±0.00
ENSMUSG00000081999 ENSMUST00000120980 0.454±0.07 N/A 0.692±0.49 1.681±1.11 0.174±0.07 0.151±0.01 0.355±0.23 0.121±0.04 4.524±5.19 0.173±0.00 0.234±0.05 0.709±0.00 0.463±0.52 1.276±0.29
ENSMUSG00000082930 ENSMUST00000121472 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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