C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein-related protein 1B (deleted in tumors)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142546 Lrp1b-002 ENSMUSG00000049252 10090 - 2:40595248-40702800 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000142546
Transcript ID Adrenal Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000142546 0.126±0.07 0.008±0.00 0.628±0.15 0.018±0.01 0.001±0.00 0.082±0.02 0.007±0.00 0.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NW CIL_0003NW_0002 CGP 2:40595248-43682715

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389484 LRP1B-001 protein_coding Homo_sapiens 0 2569
ENST00000437977 LRP1B-003 protein_coding Homo_sapiens 0 3216
ENST00000442974 LRP1B-005 protein_coding Homo_sapiens 0 575
ENST00000618808 LRP1B-201 protein_coding Homo_sapiens 0 2569

Loading