Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	glutamate receptor, ionotropic, kainate 4
ENST00000438375	GRIK4-003	ENSG00000149403	9606	+	11:120564434-120987261	protein_coding

Expression Patterns

Transcript ID	Brain	Breast	Heart	Liver	Lung	Ovary	Placenta	Testis
ENST00000438375	1.216±0.62	0.079±0.00	0.037±0.00	0.128±0.08	0.919±0.00	0.668±0.57	0.129±0.09	0.330±0.02

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0004970	IEA	ionotropic glutamate receptor activity
GO:0005234	IBA:IEA	extracellular-glutamate-gated ion channel activity
GO:0005886	TAS	plasma membrane
GO:0005887	TAS	integral component of plasma membrane
GO:0006810	TAS	transport
GO:0007215	TAS	glutamate receptor signaling pathway
GO:0007268	TAS	synaptic transmission
GO:0015277	IBA	kainate selective glutamate receptor activity
GO:0016020	IEA	membrane
GO:0030054	IEA	cell junction
GO:0030425	IBA	dendrite
GO:0032983	IBA	kainate selective glutamate receptor complex
GO:0034220	IBA	ion transmembrane transport
GO:0035235	IBA	ionotropic glutamate receptor signaling pathway
GO:0035249	IBA	synaptic transmission, glutamatergic
GO:0042734	IBA	presynaptic membrane
GO:0045211	IBA	postsynaptic membrane

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000034515	Grik4-201	protein_coding	Mus_musculus	0	4061
ENSMUST00000114865	Grik4-001	protein_coding	Mus_musculus	0	4060
ENSDART00000035812	grik4-201	protein_coding	Danio_rerio	0	1439
ENSDART00000156760	grik4-001	protein_coding	Danio_rerio	0	1439
ENSDART00000114472	GRIK5 (2 of 2)-201	protein_coding	Danio_rerio	0	553
ENSDART00000114766	grik5-201	protein_coding	Danio_rerio	2e-40	172
ENSDART00000122055	grik5-202	protein_coding	Danio_rerio	2e-40	172

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