C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000122055 grik5-202 ENSDARG00000075764 7955 + 16:13187779-13305936 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleENSDART00000122055
Transcript ID Kidney Muscle
ENSDART00000122055 0.216±0.00 0.265±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005215 IEA transporter activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0006810 IEA transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262895 GRIK5-002 protein_coding Homo_sapiens 0 918
ENST00000301218 GRIK5-001 protein_coding Homo_sapiens 0 918
ENST00000438375 GRIK4-003 protein_coding Homo_sapiens 2e-40 172
ENST00000527524 GRIK4-001 protein_coding Homo_sapiens 3e-40 172
ENST00000533291 GRIK4-002 retained_intron Homo_sapiens 9.99995e-41 172
ENST00000593562 GRIK5-004 protein_coding Homo_sapiens 0 918
ENST00000594528 GRIK5-005 nonsense_mediated_decay Homo_sapiens 0 765

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