C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000114472 GRIK5 (2 of 2)-201 ENSDARG00000078151 7955 - 19:6403891-6483075 protein_coding

Danio rerio EnsemblZv9

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Genes
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSDART00000114472
Transcript ID Muscle
ENSDART00000114472 0.121±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005215 IEA transporter activity
GO:0005216 IEA ion channel activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003468 Grik5-201 protein_coding Mus_musculus 0 1205
ENST00000262895 GRIK5-002 protein_coding Homo_sapiens 0 1288
ENST00000301218 GRIK5-001 protein_coding Homo_sapiens 0 1266
ENST00000438375 GRIK4-003 protein_coding Homo_sapiens 0 553
ENST00000527524 GRIK4-001 protein_coding Homo_sapiens 0 553
ENST00000533291 GRIK4-002 retained_intron Homo_sapiens 0 544
ENST00000593562 GRIK5-004 protein_coding Homo_sapiens 0 1288
ENST00000594528 GRIK5-005 nonsense_mediated_decay Homo_sapiens 0 793

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