C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438378 AC093838.4-001 ENSG00000152117 9606 + 2:131492813-131521573 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000438378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000438378 0.960±0.00 3.261±0.00 0.241±0.00 1.378±0.00 0.950±0.41 1.045±0.31 0.927±0.75 0.985±0.00 0.786±0.00 2.103±0.00 0.902±0.33 6.553±2.41 1.825±0.34 3.423±1.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170366 Smpd4-009 protein_coding Mus_musculus 0 2196
ENSMUST00000163476 Smpd4-002 protein_coding Mus_musculus 0 1943
ENSMUST00000165363 Smpd4-003 protein_coding Mus_musculus 0 1930
ENSMUST00000166091 Smpd4-005 retained_intron Mus_musculus 0 1860
ENSMUST00000170273 Smpd4-014 protein_coding Mus_musculus 0 1559
ENSMUST00000170401 Smpd4-006 retained_intron Mus_musculus 0 1559
ENSMUST00000090159 Smpd4-004 protein_coding Mus_musculus 0 1303
ENSMUST00000163997 Smpd4-011 protein_coding Mus_musculus 0 1103
ENSMUST00000170117 Smpd4-012 nonsense_mediated_decay Mus_musculus 0 1003
ENSMUST00000006053 Smpd4-001 protein_coding Mus_musculus 0 1003
ENSMUST00000170996 Smpd4-007 protein_coding Mus_musculus 0 821
ENSMUST00000164292 Smpd4-022 retained_intron Mus_musculus 0 717
ENSMUST00000167362 Smpd4-013 processed_transcript Mus_musculus 0 643
ENSMUST00000167217 Smpd4-010 nonsense_mediated_decay Mus_musculus 0 599
ENSMUST00000163592 Smpd4-015 protein_coding Mus_musculus 0 374
ENSMUST00000168101 Smpd4-008 protein_coding Mus_musculus 0 351
ENSMUST00000171435 Smpd4-019 protein_coding Mus_musculus 0 316
ENSMUST00000172182 Smpd4-021 protein_coding Mus_musculus 0 296
ENSMUST00000169662 Smpd4-018 protein_coding Mus_musculus 0 281
ENSMUST00000167592 Smpd4-020 retained_intron Mus_musculus 0 268
ENSMUST00000165092 Smpd4-016 protein_coding Mus_musculus 2e-25 122
ENSMUST00000166322 Smpd4-023 retained_intron Mus_musculus 3e-23 115

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