C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438379 AC006028.11-001 ENSG00000231357 9606 + 7:2835621-2836022 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLungOvaryPlacentaTestisENST00000438379
Transcript ID Adrenal Breast Colon Heart Lung Ovary Placenta Testis
ENST00000438379 0.030±0.00 0.211±0.00 0.600±0.00 0.130±0.00 0.087±0.00 0.619±0.00 0.102±0.00 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RS CIL_0007RS_0001 VISTA 7:2311652-2915186
CIL_0002MB CIL_0002MB_0001 CGP 7:2679522-2844324
CIL_0002MC CIL_0002MC_0001 CGP 7:2728112-3043945

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063682 Pfdn4-001 protein_coding Mus_musculus 0 348
ENSMUST00000109148 Pfdn4-003 protein_coding Mus_musculus 0 316
ENSMUST00000075087 Pfdn4-006 protein_coding Mus_musculus 0 316
ENSMUST00000136839 Pfdn4-004 protein_coding Mus_musculus 0 292
ENSMUST00000109147 Pfdn4-007 protein_coding Mus_musculus 0 278
ENSMUST00000170167 Pfdn4-008 protein_coding Mus_musculus 0 276

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