C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002MC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146535-ENSG00000198286 CGP 9606 7:2728112-3043945
GeneTranscriptPositionBiotype
ENSG00000146535 (GNA12)
guanine nucleotide binding protein (G protein) alpha 12 		ENST00000275364 (GNA12-001) 2728112-2844324 protein_coding
ENST00000407653 (GNA12-005) 2728566-2763140 protein_coding
ENST00000407904 (GNA12-002) 2728561-2815259 protein_coding
ENST00000447791 (GNA12-006) 2794967-2815258 protein_coding
ENST00000471281 (GNA12-007) 2731023-2795145 processed_transcript
ENST00000485329 (GNA12-008) 2731351-2760452 processed_transcript
ENST00000491117 (GNA12-004) 2728561-2763209 processed_transcript
ENST00000496740 (GNA12-003) 2729824-2763327 processed_transcript
ENSG00000174945 (AMZ1)
archaelysin family metallopeptidase 1 		ENST00000312371 (AMZ1-001) 2679522-2716529 protein_coding
ENST00000407112 (AMZ1-002) 2688202-2713100 protein_coding
ENST00000433945 (AMZ1-006) 2764608-2775500 processed_transcript
ENST00000480560 (AMZ1-005) 2702476-2709114 retained_intron
ENST00000485540 (AMZ1-003) 2702021-2709189 processed_transcript
ENST00000489665 (AMZ1-004) 2702530-2765125 processed_transcript
ENSG00000198286 (CARD11)
caspase recruitment domain family, member 11 		ENST00000355508 (CARD11-013) 2919480-2930060 protein_coding
ENST00000356408 (CARD11-012) 2947576-3043845 protein_coding
ENST00000396946 (CARD11-011) 2906141-3043945 protein_coding
ENST00000480332 (CARD11-014) 2917290-2923040 retained_intron
ENSG00000201794 (RN7SKP130)
RNA, 7SK small nuclear pseudogene 130 		ENST00000364924 (RN7SKP130-201) 2999094-2999394 misc_RNA
ENSG00000231357 (AC006028.11)
 ENST00000438379 (AC006028.11-001) 2835621-2836022 processed_pseudogene
ENSG00000237286 (AC004906.3)
 ENST00000423194 (AC004906.3-001) 2944035-2947091 antisense
CIL_0002MC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000149-ENSMUSG00000036526 CGP 10090 5:140758408-141000596
GeneTranscriptPositionBiotype
ENSMUSG00000000149 (Gna12)
guanine nucleotide binding protein, alpha 12 		ENSMUST00000000153 (Gna12-001) 140758408-140830431 protein_coding
ENSMUSG00000036526 (Card11)
caspase recruitment domain family, member 11 		ENSMUST00000085786 (Card11-201) 140872999-141000596 protein_coding
ENSMUSG00000050022 (Amz1)
archaelysin family metallopeptidase 1 		ENSMUST00000060918 (Amz1-001) 140724127-140753310 protein_coding
ENSMUST00000120630 (Amz1-003) 140735526-140754691 protein_coding
ENSMUST00000126975 (Amz1-002) 140724127-140728344 processed_transcript
ENSMUST00000155644 (Amz1-005) 140743884-140748191 retained_intron
ENSMUST00000156006 (Amz1-004) 140735567-140741235 processed_transcript
ENSMUST00000176035 (Amz1-006) 140749283-140761439 nonsense_mediated_decay
ENSMUST00000177057 (Amz1-007) 140724138-140724797 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MC_0001ENSG00000146535ENST00000275364ENST00000407653ENST00000407904ENST00000447791ENST00000471281ENST00000485329ENST00000491117ENST00000496740ENSG00000174945ENST00000312371ENST00000407112ENST00000433945ENST00000480560ENST00000485540ENST00000489665ENSG00000198286ENST00000355508ENST00000356408ENST00000396946ENST00000480332ENSG00000201794ENST00000364924ENSG00000231357ENST00000438379ENSG00000237286ENST00000423194CIL_0002MC_0002ENSMUSG00000000149ENSMUST00000000153ENSMUSG00000036526ENSMUST00000085786ENSMUSG00000050022ENSMUST00000060918ENSMUST00000120630ENSMUST00000126975ENSMUST00000155644ENSMUST00000156006ENSMUST00000176035ENSMUST00000177057
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MC_0001ENSG00000146535ENST00000275364ENST00000407653ENST00000407904ENST00000491117ENSG00000174945ENST00000312371ENST00000407112ENST00000433945ENST00000480560ENST00000485540ENST00000489665ENSG00000198286ENST00000355508ENST00000356408ENST00000396946ENSG00000201794ENST00000364924ENSG00000231357ENST00000438379ENSG00000237286ENST00000423194CIL_0002MC_0002ENSMUSG00000000149ENSMUST00000000153ENSMUSG00000036526ENSMUST00000085786ENSMUSG00000050022ENSMUST00000060918
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146535 ENST00000275364 8.691±0.00 11.007±0.00 N/A 6.567±5.73 5.772±5.22 5.952±4.24 2.555±0.00 4.832±0.00 1.610±1.10 3.337±2.29 1.498±0.00 6.607±3.86 15.548±9.38 8.985±1.32
ENST00000407653 N/A N/A N/A N/A N/A N/A 0.430±0.00 N/A N/A N/A N/A 3.535±0.00 N/A N/A
ENST00000407904 N/A N/A N/A 1.053±0.00 0.831±0.00 N/A N/A N/A 1.550±0.00 N/A 0.912±0.00 2.839±0.00 5.632±3.41 6.874±0.00
ENST00000447791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491117 12.460±0.00 18.584±0.00 N/A 11.232±0.00 18.346±0.00 13.365±0.00 8.823±0.00 2.827±2.26 3.657±0.00 12.927±0.00 2.540±0.00 23.523±5.48 13.609±2.84 13.058±0.00
ENST00000496740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174945 ENST00000312371 0.026±0.00 N/A N/A 0.731±0.00 0.024±0.00 N/A N/A 0.021±0.00 N/A 0.050±0.00 N/A 0.037±0.01 N/A 0.056±0.00
ENST00000407112 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A 0.045±0.00 0.140±0.00 N/A 0.101±0.00 1.033±0.00 0.177±0.00
ENST00000433945 N/A N/A N/A N/A N/A N/A 0.048±0.00 0.096±0.00 N/A 1.429±0.00 N/A 0.099±0.00 N/A 0.410±0.00
ENST00000480560 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.329±0.00 N/A N/A N/A N/A
ENST00000485540 N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489665 N/A 0.456±0.00 N/A N/A N/A 0.095±0.00 0.028±0.00 N/A N/A N/A N/A 0.059±0.00 N/A N/A
ENSG00000198286 ENST00000355508 N/A N/A 0.245±0.00 N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A
ENST00000356408 N/A N/A N/A N/A N/A N/A N/A N/A 1.529±0.00 1.151±0.00 N/A N/A N/A N/A
ENST00000396946 0.139±0.00 11.159±0.00 0.146±0.00 0.197±0.00 0.510±0.00 0.114±0.00 0.044±0.00 0.394±0.00 0.188±0.02 2.470±2.19 0.154±0.00 4.573±5.44 0.416±0.18 0.211±0.00
ENST00000480332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201794 ENST00000364924 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A
ENSG00000231357 ENST00000438379 N/A 0.030±0.00 N/A N/A 0.211±0.00 0.600±0.00 0.130±0.00 N/A N/A 0.087±0.00 N/A 0.619±0.00 0.102±0.00 0.034±0.00
ENSG00000237286 ENST00000423194 N/A N/A N/A 0.364±0.00 N/A N/A N/A N/A 0.095±0.00 N/A N/A 1.560±0.00 N/A 0.892±0.49
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000149 ENSMUST00000000153 47.850±1.74 68.099±11.57 22.126±7.11 35.511±1.36 39.853±11.23 23.438±2.04 44.229±3.29 42.392±12.48 23.106±12.31 52.390±1.21 7.394±0.45 54.753±11.67 26.834±7.43 14.106±4.39
ENSMUSG00000036526 ENSMUST00000085786 0.407±0.38 0.259±0.09 0.374±0.05 0.050±0.02 3.285±2.08 1.179±0.27 0.169±0.12 0.470±0.35 0.100±0.06 5.074±0.78 0.286±0.14 0.928±0.36 0.175±0.12 0.230±0.12
ENSMUSG00000050022 ENSMUST00000060918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.041±1.42 N/A
ENSMUST00000120630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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