C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438481 RP11-331N16.1-001 ENSG00000230199 9606 + 1:242975005-242975084 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleTestisENST00000438481
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Testis
ENST00000438481 2.051±0.00 1.115±0.00 1.201±0.00 3.515±0.00 2.687±0.00 4.814±0.00 1.715±0.00 1.266±0.00 1.648±0.00 2.004±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L6 CIL_0000L6_0002 CGP 1:242082986-243255406

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086236 Gm10180-201 processed_pseudogene Mus_musculus 8e-23 108
ENSMUST00000179668 Gm10736-201 processed_pseudogene Mus_musculus 8e-23 108
ENSMUST00000178135 Gm3699-201 processed_pseudogene Mus_musculus 8e-23 108
ENSMUST00000176010 Rpl41-001 protein_coding Mus_musculus 8e-23 108
ENSMUST00000176683 Rpl41-003 protein_coding Mus_musculus 8e-23 108
ENSMUST00000177163 Rpl41-002 protein_coding Mus_musculus 8e-23 108
ENSMUST00000073238 Gm10076-201 protein_coding Mus_musculus 8e-23 108
ENSMUST00000176184 Rpl41-004 retained_intron Mus_musculus 5e-20 99
ENSMUST00000177513 Rpl41-006 retained_intron Mus_musculus 5e-20 99
ENSMUST00000176906 Rpl41-007 protein_coding Mus_musculus 0.0000000000008 75

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