C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translation machinery associated 7 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438607 TMA7-001 ENSG00000232112 9606 + 3:48440257-48444208 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000438607
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000438607 74.579±0.00 114.090±0.00 4.883±0.00 75.367±43.46 53.206±37.88 50.267±38.32 39.879±33.04 59.618±43.49 41.137±30.12 60.750±52.12 36.219±27.36 107.692±76.51 105.396±15.52 120.636±45.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0001 VISTA 3:47843366-48458182
CIL_000351 CIL_000351_0002 CGP 3:48432164-48444208

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167504 Tma7-201 protein_coding Mus_musculus 0 392
ENSMUST00000118448 Tma7-ps-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000120584 Gm15610-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000122256 Gm14200-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000171662 Gm9613-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000118935 Gm15235-001 processed_pseudogene Mus_musculus 0 219

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