C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14200
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122256 Gm14200-001 ENSMUSG00000081800 10090 - 2:158468169-158468360 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLiverLungOvaryPlacentaENSMUST00000122256
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000122256 20.034±0.00 3.301±0.23 1.274±0.00 1.418±0.08 3.683±1.07 12.167±0.00 1.031±0.46 10.001±0.00 15.942±15.21 0.503±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388
CIL_0004O2 CIL_0004O2_0002 CGP 2:158409848-158508198

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000418558 RP11-340I6.4-001 processed_pseudogene Homo_sapiens 0 226
ENST00000420575 RP4-631H13.6-001 processed_pseudogene Homo_sapiens 0 228
ENST00000433132 RP1-159A19.3-001 processed_pseudogene Homo_sapiens 0 255
ENST00000438607 TMA7-001 protein_coding Homo_sapiens 0 278
ENST00000477624 TMA7-004 retained_intron Homo_sapiens 0 268
ENST00000479126 TMA7-003 retained_intron Homo_sapiens 3e-26 122
ENST00000520566 CTB-79E8.3-001 processed_pseudogene Homo_sapiens 0 261
ENST00000521201 CTC-308K20.4-001 processed_pseudogene Homo_sapiens 2e-32 141

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