C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromobox homolog 1 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439415 CBX1P4-001 ENSG00000214321 9606 + X:17282637-17283093 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLungOvaryENST00000439415
Transcript ID Breast Kidney Lung Ovary
ENST00000439415 0.208±0.00 0.034±0.00 0.713±0.00 0.156±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002L3 CIL_0002L3_0002 CGP X:16946691-17735994

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093943 Cbx1-001 protein_coding Mus_musculus 0 527
ENSMUST00000079702 Cbx1-002 protein_coding Mus_musculus 0 361
ENSMUST00000134585 Cbx1-003 nonsense_mediated_decay Mus_musculus 0 361
ENSMUST00000018810 Cbx1-005 protein_coding Mus_musculus 0 361
ENSMUST00000118932 Gm15211-001 processed_pseudogene Mus_musculus 0 268

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