C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NMD3 ribosome export adaptor pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439704 NMD3P1-001 ENSG00000226342 9606 - 7:63908966-63910453 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungOvaryTestisENST00000439704
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Ovary Testis
ENST00000439704 0.073±0.00 0.060±0.00 0.135±0.06 0.203±0.00 0.042±0.00 0.073±0.00 0.201±0.17 0.049±0.04 0.210±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029358 Nmd3-001 protein_coding Mus_musculus 0 1688
ENSMUST00000127211 Nmd3-002 retained_intron Mus_musculus 0 601
ENSMUST00000143041 Nmd3-003 nonsense_mediated_decay Mus_musculus 0 448
ENSMUST00000150210 Nmd3-007 retained_intron Mus_musculus 0 383
ENSMUST00000135266 Nmd3-005 processed_transcript Mus_musculus 0 316
ENSMUST00000143249 Nmd3-006 protein_coding Mus_musculus 0 211
ENSMUST00000149680 Nmd3-004 retained_intron Mus_musculus 1e-38 165

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