C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NMD3 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150210 Nmd3-007 ENSMUSG00000027787 10090 + 3:69746432-69749042 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000150210
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000150210 16.213±0.00 35.077±0.00 67.797±29.88 15.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z9 CIL_0001Z9_0002 CGP 3:69574186-69749042
CIL_0004K1 CIL_0004K1_0003 CGP 3:69721985-69859896

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351193 NMD3-001 protein_coding Homo_sapiens 0 481
ENST00000421815 NMD3P2-001 processed_pseudogene Homo_sapiens 0 350
ENST00000439704 NMD3P1-001 processed_pseudogene Homo_sapiens 0 383
ENST00000460469 NMD3-005 protein_coding Homo_sapiens 0 481
ENST00000472947 NMD3-002 protein_coding Homo_sapiens 0 453

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