C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromobox homolog 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440184 CBX1P1-001 ENSG00000230823 9606 - X:63299247-63299673 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000440184
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000440184 0.032±0.00 0.179±0.00 0.203±0.00 0.255±0.00 0.579±0.00 0.237±0.00 0.483±0.00 0.114±0.00 0.064±0.00 0.512±0.00 0.030±0.00 0.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057E CIL_00057E_0001 CGP X:57906708-63351344

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093943 Cbx1-001 protein_coding Mus_musculus 0 571
ENSMUST00000079702 Cbx1-002 protein_coding Mus_musculus 0 555
ENSMUST00000134585 Cbx1-003 nonsense_mediated_decay Mus_musculus 0 555
ENSMUST00000018810 Cbx1-005 protein_coding Mus_musculus 0 555
ENSMUST00000118932 Gm15211-001 processed_pseudogene Mus_musculus 0 250

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