C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH2 domain containing 3C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440630 SH2D3C-002 ENSG00000095370 9606 - 9:127744898-127762416 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverOvaryENST00000440630
Transcript ID Bladder Brain Breast Heart Liver Ovary
ENST00000440630 0.415±0.00 0.362±0.00 1.945±0.00 0.821±0.00 1.299±0.00 0.590±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0001 VISTA 9:127227593-127829012
CIL_0002CG CIL_0002CG_0002 CGP 9:127731524-127778741

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113242 Sh2d3c-002 protein_coding Mus_musculus 0 1057
ENSMUST00000074248 Sh2d3c-001 protein_coding Mus_musculus 0 1057
ENSMUST00000131101 Sh2d3c-003 protein_coding Mus_musculus 0 754
ENSMUST00000124133 Sh2d3c-004 processed_transcript Mus_musculus 5e-31 139

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