C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000025612-ENSDARG00000009081 CGP 7955 5:67621843-67668620
GeneTranscriptPositionBiotype
ENSDARG00000009081 (sh2d3cb)
SH2 domain containing 3Cb 		ENSDART00000003444 (sh2d3cb-001) 67633530-67667565 protein_coding
ENSDART00000142134 (sh2d3cb-002) 67650867-67668620 protein_coding
ENSDART00000143500 (sh2d3cb-003) 67650655-67663093 protein_coding
ENSDARG00000025612 (tor2a)
torsin family 2, member A 		ENSDART00000050850 (tor2a-001) 67621843-67631109 protein_coding
ENSDARG00000090068 (C5H9orf117)
chromosome 9 open reading frame 117 		ENSDART00000130638 (C5H9orf117-001) 67666938-67681068 protein_coding
CIL_0002CG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160404-ENSG00000095370 CGP 9606 9:127731524-127778741
GeneTranscriptPositionBiotype
ENSG00000095370 (SH2D3C)
SH2 domain containing 3C 		ENST00000314830 (SH2D3C-004) 127738319-127778741 protein_coding
ENST00000373276 (SH2D3C-201) 127738318-127771369 protein_coding
ENST00000373277 (SH2D3C-007) 127738317-127771438 protein_coding
ENST00000414380 (SH2D3C-010) 127749212-127755030 protein_coding
ENST00000420366 (SH2D3C-008) 127738318-127755304 protein_coding
ENST00000429553 (SH2D3C-202) 127738318-127762418 protein_coding
ENST00000440630 (SH2D3C-002) 127744898-127762416 protein_coding
ENST00000464239 (SH2D3C-005) 127745018-127762188 processed_transcript
ENST00000468969 (SH2D3C-009) 127741845-127778710 processed_transcript
ENST00000471939 (SH2D3C-001) 127742849-127774144 processed_transcript
ENST00000484160 (SH2D3C-011) 127742659-127744720 processed_transcript
ENST00000488685 (SH2D3C-003) 127747147-127762287 processed_transcript
ENSG00000160404 (TOR2A)
torsin family 2, member A 		ENST00000336067 (TOR2A-005) 127731524-127735292 protein_coding
ENST00000373281 (TOR2A-002) 127731525-127735294 protein_coding
ENST00000373284 (TOR2A-006) 127731524-127735317 protein_coding
ENST00000463256 (TOR2A-008) 127731780-127735275 nonsense_mediated_decay
ENST00000463577 (TOR2A-004) 127731525-127735294 protein_coding
ENST00000472723 (TOR2A-003) 127731527-127735307 retained_intron
ENST00000493439 (TOR2A-009) 127732169-127735275 protein_coding
ENST00000494135 (TOR2A-001) 127731912-127732874 retained_intron
ENST00000496460 (TOR2A-007) 127731844-127735313 nonsense_mediated_decay
ENSG00000167094 (TTC16)
tetratricopeptide repeat domain 16 		ENST00000373289 (TTC16-001) 127716066-127731600 protein_coding
ENST00000488285 (TTC16-003) 127720289-127731589 retained_intron
ENST00000489226 (TTC16-002) 127720279-127731522 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CG_0001ENSDARG00000009081ENSDART00000003444ENSDART00000142134ENSDART00000143500ENSDARG00000025612ENSDART00000050850ENSDARG00000090068ENSDART00000130638CIL_0002CG_0002ENSG00000095370ENST00000314830ENST00000373276ENST00000373277ENST00000414380ENST00000420366ENST00000429553ENST00000440630ENST00000464239ENST00000468969ENST00000471939ENST00000484160ENST00000488685ENSG00000160404ENST00000336067ENST00000373281ENST00000373284ENST00000463256ENST00000463577ENST00000472723ENST00000493439ENST00000494135ENST00000496460ENSG00000167094ENST00000373289ENST00000488285ENST00000489226
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CG_0001ENSDARG00000009081ENSDART00000003444ENSDARG00000025612ENSDART00000050850ENSDARG00000090068ENSDART00000130638CIL_0002CG_0002ENSG00000095370ENST00000314830ENST00000373276ENST00000373277ENST00000414380ENST00000420366ENST00000429553ENST00000440630ENST00000471939ENST00000484160ENST00000488685ENSG00000160404ENST00000336067ENST00000373281ENST00000373284ENST00000472723ENST00000496460ENSG00000167094ENST00000373289ENST00000488285ENST00000489226
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009081 ENSDART00000003444 N/A N/A N/A 2.103±1.41 N/A N/A 2.750±0.00 2.443±0.67 N/A N/A 3.209±0.00 N/A N/A N/A
ENSDART00000142134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000025612 ENSDART00000050850 N/A N/A N/A 1.896±0.00 N/A N/A 0.763±0.23 1.108±0.54 0.287±0.00 N/A 0.509±0.00 N/A N/A N/A
ENSDARG00000090068 ENSDART00000130638 N/A N/A N/A 1.419±0.37 N/A N/A N/A 1.665±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095370 ENST00000314830 4.067±0.00 5.566±0.00 0.062±0.00 N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A 1.288±0.28 2.203±1.19 N/A
ENST00000373276 N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373277 9.930±0.00 22.574±0.00 0.186±0.00 1.507±0.00 4.622±0.00 2.164±0.00 1.019±0.61 4.840±0.00 0.503±0.33 8.219±0.00 0.723±0.00 3.282±3.16 4.932±3.14 5.002±0.00
ENST00000414380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A
ENST00000420366 N/A N/A N/A 2.172±1.87 1.890±0.00 N/A 1.538±0.00 0.394±0.00 N/A N/A 0.861±0.00 N/A N/A 0.577±0.00
ENST00000429553 N/A N/A N/A N/A 1.030±0.62 N/A N/A N/A N/A 8.955±0.00 N/A 1.454±1.05 N/A N/A
ENST00000440630 N/A N/A 0.415±0.00 0.362±0.00 1.945±0.00 N/A 0.821±0.00 N/A 1.299±0.00 N/A N/A 0.590±0.00 N/A N/A
ENST00000464239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471939 N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.468±0.00 N/A N/A
ENST00000488685 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.430±0.00 N/A N/A N/A N/A
ENSG00000160404 ENST00000336067 N/A N/A N/A N/A 1.582±0.00 0.501±0.00 0.210±0.00 N/A N/A N/A N/A N/A 2.703±0.00 N/A
ENST00000373281 N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A 2.185±0.00 N/A N/A
ENST00000373284 3.129±0.00 3.906±0.00 N/A 1.133±0.00 3.501±0.00 0.750±0.34 1.648±0.00 5.798±0.00 4.310±0.00 N/A N/A 8.915±5.07 12.098±5.14 10.188±0.00
ENST00000463256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472723 N/A N/A N/A 0.324±0.00 N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496460 N/A 7.749±0.00 0.607±0.00 3.464±0.00 N/A 2.303±0.00 N/A N/A N/A N/A 1.278±0.00 18.845±0.00 5.224±0.00 N/A
ENSG00000167094 ENST00000373289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.184±5.40
ENST00000488285 N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489226 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A

Loading