C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441073 RP11-296P7.4-001 ENSG00000236680 9606 + 9:19026892-19028129 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonOvaryENST00000441073
Transcript ID Adrenal Brain Breast Colon Ovary
ENST00000441073 0.093±0.00 0.050±0.02 0.058±0.03 0.015±0.00 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DA CIL_0007DA_0001 CGP 9:18473894-19049354
CIL_0007D9 CIL_0007D9_0001 CGP 9:18927658-19050983

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067663 Psmc3-001 protein_coding Mus_musculus 0 1223
ENSMUST00000002171 Psmc3-009 protein_coding Mus_musculus 0 1075
ENSMUST00000111441 Psmc3-002 protein_coding Mus_musculus 0 946
ENSMUST00000185715 Psmc3-010 protein_coding Mus_musculus 0 926
ENSMUST00000146506 Psmc3-007 nonsense_mediated_decay Mus_musculus 0 728

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