C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178031-ENSG00000155875 CGP 9606 9:18473894-19049354
GeneTranscriptPositionBiotype
ENSG00000155875 (FAM154A)
family with sequence similarity 154, member A 		ENST00000380530 (FAM154A-002) 18927892-19033253 protein_coding
ENST00000380534 (FAM154A-001) 18927658-19033188 protein_coding
ENST00000542071 (FAM154A-201) 18927662-19049354 protein_coding
ENST00000583128 (FAM154A-004) 18947692-19033209 processed_transcript
ENSG00000178031 (ADAMTSL1)
ADAMTS-like 1 		ENST00000276935 (ADAMTSL1-005) 18474233-18723917 protein_coding
ENST00000327883 (ADAMTSL1-001) 18474100-18684957 protein_coding
ENST00000380538 (ADAMTSL1-014) 18829923-18890790 protein_coding
ENST00000380545 (ADAMTSL1-011) 18826138-18908609 protein_coding
ENST00000380548 (ADAMTSL1-012) 18473894-18910950 protein_coding
ENST00000380559 (ADAMTSL1-010) 18706641-18910947 retained_intron
ENST00000380566 (ADAMTSL1-002) 18474169-18681483 protein_coding
ENST00000380570 (ADAMTSL1-003) 18474153-18622619 protein_coding
ENST00000388710 (ADAMTSL1-009) 18826148-18908609 nonsense_mediated_decay
ENST00000431052 (ADAMTSL1-004) 18474144-18574527 protein_coding
ENST00000489062 (ADAMTSL1-007) 18905491-18910947 retained_intron
ENST00000496521 (ADAMTSL1-006) 18793225-18796762 processed_transcript
ENST00000542621 (ADAMTSL1-008) 18826138-18910294 nonsense_mediated_decay
ENST00000546040 (ADAMTSL1-013) 18657615-18684957 retained_intron
ENSG00000236680 (RP11-296P7.4)
 ENST00000441073 (RP11-296P7.4-001) 19026892-19028129 processed_pseudogene
ENSG00000236857 (RAP1BP1)
RAP1B, member of RAS oncogene family pseudogene 1 		ENST00000412709 (RAP1BP1-001) 18717974-18718526 processed_pseudogene
ENSG00000252960 (RN7SKP258)
RNA, 7SK small nuclear pseudogene 258 		ENST00000517151 (RN7SKP258-201) 18651147-18651450 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007DA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066113-ENSMUSG00000028492 CGP 10090 4:86053915-86558328
GeneTranscriptPositionBiotype
ENSMUSG00000028492 (Fam154a)
family with sequence similarity 154, member A 		ENSMUST00000030216 (Fam154a-001) 86444641-86558303 protein_coding
ENSMUST00000133793 (Fam154a-004) 86479008-86557995 processed_transcript
ENSMUST00000139694 (Fam154a-002) 86481549-86558328 processed_transcript
ENSMUST00000151481 (Fam154a-003) 86444641-86539117 processed_transcript
ENSMUSG00000066113 (Adamtsl1)
ADAMTS-like 1 		ENSMUST00000048885 (Adamtsl1-002) 86053923-86252973 protein_coding
ENSMUST00000107177 (Adamtsl1-005) 86276766-86428382 retained_intron
ENSMUST00000107178 (Adamtsl1-201) 86053915-86428382 protein_coding
ENSMUST00000120678 (Adamtsl1-003) 86053975-86199695 protein_coding
ENSMUST00000126654 (Adamtsl1-007) 86087799-86111316 retained_intron
ENSMUST00000130474 (Adamtsl1-009) 86053915-86087961 retained_intron
ENSMUST00000136320 (Adamtsl1-008) 86199317-86248129 protein_coding
ENSMUST00000136418 (Adamtsl1-006) 86276489-86277102 processed_transcript
ENSMUST00000141889 (Adamtsl1-001) 86053928-86428385 protein_coding
ENSMUST00000150043 (Adamtsl1-004) 86054020-86234431 retained_intron
ENSMUSG00000083272 (Gm12550)
predicted gene 12550 		ENSMUST00000118478 (Gm12550-001) 86442013-86442341 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DA_0001ENSG00000155875ENST00000380530ENST00000380534ENST00000542071ENST00000583128ENSG00000178031ENST00000276935ENST00000327883ENST00000380538ENST00000380545ENST00000380548ENST00000380559ENST00000380566ENST00000380570ENST00000388710ENST00000431052ENST00000489062ENST00000496521ENST00000542621ENST00000546040ENSG00000236680ENST00000441073ENSG00000236857ENST00000412709ENSG00000252960ENST00000517151CIL_0007DA_0002ENSMUSG00000028492ENSMUST00000030216ENSMUST00000133793ENSMUST00000139694ENSMUST00000151481ENSMUSG00000066113ENSMUST00000048885ENSMUST00000107177ENSMUST00000107178ENSMUST00000120678ENSMUST00000126654ENSMUST00000130474ENSMUST00000136320ENSMUST00000136418ENSMUST00000141889ENSMUST00000150043ENSMUSG00000083272ENSMUST00000118478
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DA_0001ENSG00000155875ENST00000380530ENST00000380534ENST00000542071ENST00000583128ENSG00000178031ENST00000276935ENST00000327883ENST00000380548ENST00000380559ENST00000380566ENST00000380570ENST00000388710ENST00000431052ENST00000489062ENST00000542621ENST00000546040ENSG00000236680ENST00000441073ENSG00000236857ENST00000412709ENSG00000252960ENST00000517151CIL_0007DA_0002ENSMUSG00000028492ENSMUST00000030216ENSMUST00000139694ENSMUST00000151481ENSMUSG00000066113ENSMUST00000048885ENSMUST00000107177ENSMUST00000107178ENSMUST00000120678ENSMUST00000136320ENSMUST00000136418ENSMUST00000141889ENSMUSG00000083272ENSMUST00000118478
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155875 ENST00000380530 N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A 0.125±0.00 N/A 0.019±0.01 0.024±0.00 11.492±5.55
ENST00000380534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.098±1.10
ENST00000542071 0.015±0.00 N/A N/A 0.033±0.00 N/A N/A N/A N/A 0.074±0.06 N/A N/A 0.017±0.00 N/A 1.188±0.00
ENST00000583128 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.619±0.00 N/A N/A N/A N/A
ENSG00000178031 ENST00000276935 N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A 0.520±0.00 N/A N/A N/A N/A
ENST00000327883 N/A N/A N/A N/A 1.778±0.00 N/A N/A N/A N/A N/A N/A 0.395±0.00 0.086±0.00 N/A
ENST00000380538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380548 0.609±0.00 N/A N/A 0.070±0.00 0.161±0.00 0.658±0.00 N/A 0.688±0.00 0.080±0.06 0.183±0.08 N/A 0.231±0.11 N/A N/A
ENST00000380559 0.318±0.00 0.522±0.00 N/A 0.047±0.00 0.266±0.00 0.860±0.00 0.040±0.00 N/A 0.108±0.08 0.402±0.33 N/A 0.667±0.02 0.135±0.01 0.996±0.00
ENST00000380566 N/A N/A 0.319±0.00 N/A 0.655±0.00 0.733±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380570 N/A N/A N/A N/A N/A N/A 0.664±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000388710 N/A N/A N/A N/A N/A N/A 0.257±0.00 N/A N/A N/A N/A N/A 0.263±0.00 N/A
ENST00000431052 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.560±0.00 N/A N/A N/A N/A
ENST00000489062 N/A N/A N/A N/A N/A 0.529±0.00 N/A N/A N/A N/A 0.067±0.00 0.052±0.00 N/A N/A
ENST00000496521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542621 N/A 0.934±0.00 N/A 0.162±0.01 N/A N/A 0.194±0.00 0.615±0.00 0.449±0.25 N/A 0.094±0.00 N/A N/A 0.850±0.00
ENST00000546040 N/A N/A N/A N/A 0.445±0.00 N/A 0.338±0.00 N/A N/A N/A N/A 0.665±0.00 0.159±0.00 N/A
ENSG00000236680 ENST00000441073 N/A 0.093±0.00 N/A 0.050±0.02 0.058±0.03 0.015±0.00 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A
ENSG00000236857 ENST00000412709 0.018±0.00 N/A N/A 0.017±0.00 0.397±0.31 0.015±0.00 N/A N/A 0.183±0.00 N/A N/A 0.027±0.00 N/A N/A
ENSG00000252960 ENST00000517151 N/A N/A N/A N/A 0.935±0.00 N/A N/A N/A 1.902±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028492 ENSMUST00000030216 N/A N/A N/A N/A N/A N/A 0.038±0.00 0.065±0.00 N/A N/A N/A N/A N/A 34.014±11.92
ENSMUST00000133793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139694 N/A N/A 0.020±0.00 N/A N/A N/A 0.076±0.05 0.058±0.00 N/A N/A N/A N/A N/A 21.339±0.00
ENSMUST00000151481 0.037±0.03 N/A 0.008±0.00 0.020±0.02 0.045±0.03 0.083±0.04 0.062±0.02 0.025±0.01 N/A N/A N/A 0.089±0.04 0.004±0.00 N/A
ENSMUSG00000066113 ENSMUST00000048885 0.863±0.00 N/A N/A N/A N/A N/A 0.290±0.00 N/A 0.080±0.01 N/A N/A N/A N/A N/A
ENSMUST00000107177 1.697±1.84 1.311±0.48 5.837±0.02 0.548±0.07 0.955±0.18 0.829±0.18 0.371±0.14 0.209±0.02 0.078±0.02 1.622±0.00 0.171±0.04 2.034±0.68 0.239±0.15 0.443±0.26
ENSMUST00000107178 1.201±0.99 0.383±0.11 2.508±0.28 0.342±0.01 0.801±0.16 N/A 0.164±0.07 0.694±0.25 0.031±0.01 0.620±0.13 0.223±0.08 1.223±0.86 0.204±0.03 0.299±0.08
ENSMUST00000120678 N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.08 N/A N/A N/A 0.158±0.07 N/A
ENSMUST00000126654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136320 N/A N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A
ENSMUST00000141889 N/A 0.802±0.21 2.750±0.18 N/A N/A 0.416±0.00 N/A 0.306±0.00 0.090±0.04 0.685±0.00 0.128±0.08 N/A N/A N/A
ENSMUST00000150043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083272 ENSMUST00000118478 0.283±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.252±0.00

Loading