C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribulose-5-phosphate-3-epimerase-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441178 RPEL1-001 ENSG00000235376 9606 + 10:103245887-103248016 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyOvaryTestisENST00000441178
Transcript ID Adrenal Brain Breast Kidney Ovary Testis
ENST00000441178 0.023±0.00 0.072±0.01 0.107±0.10 0.036±0.00 0.014±0.00 0.064±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004750 IEA ribulose-phosphate 3-epimerase activity
GO:0005975 IEA carbohydrate metabolic process
GO:0006098 IEA pentose-phosphate shunt
GO:0008152 IEA metabolic process
GO:0016857 IEA racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027157 Rpe-001 protein_coding Mus_musculus 0 1051
ENSMUST00000113995 Rpe-002 protein_coding Mus_musculus 0 942
ENSMUST00000142920 Rpe-003 nonsense_mediated_decay Mus_musculus 0 894
ENSMUST00000190404 Rpe-005 nonsense_mediated_decay Mus_musculus 0 739
ENSMUST00000151016 Rpe-004 nonsense_mediated_decay Mus_musculus 8e-37 159

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