C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441476 PMS2-201 ENSG00000122512 9606 - 7:5973242-6009106 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000441476
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000441476 0.610±0.00 1.559±0.00 2.744±0.00 1.490±0.00 0.606±0.00 0.226±0.09 1.343±0.00 0.349±0.00 0.703±0.00 1.862±1.45 1.441±0.00 1.566±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006298 IEA mismatch repair
GO:0015630 IDA microtubule cytoskeleton
GO:0030983 IEA mismatched DNA binding
GO:0032300 IEA mismatch repair complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126331 Pms2-004 retained_intron Mus_musculus 0 857
ENSMUST00000110707 Pms2-005 processed_transcript Mus_musculus 0 857
ENSMUST00000141942 Pms2-007 retained_intron Mus_musculus 0 857
ENSMUST00000170083 Pms2-003 processed_transcript Mus_musculus 0 857
ENSMUST00000148011 Pms2-001 protein_coding Mus_musculus 0 857
ENSMUST00000110710 Pms2-002 processed_transcript Mus_musculus 0 852
ENSMUST00000110709 Pms2-014 protein_coding Mus_musculus 0 460
ENSMUST00000147910 Pms2-009 processed_transcript Mus_musculus 0 460
ENSMUST00000154781 Pms2-006 retained_intron Mus_musculus 0 294
ENSMUST00000128207 Pms2-010 retained_intron Mus_musculus 5e-25 121
ENSMUST00000168085 Pms2-012 processed_transcript Mus_musculus 2e-24 119

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