C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junctional adhesion molecule 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441717 JAM3-002 ENSG00000166086 9606 + 11:134069071-134151751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000441717
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000441717 15.058±0.00 13.295±0.00 28.310±0.00 6.393±0.98 28.985±0.00 6.254±0.00 6.586±0.00 19.850±0.00 3.707±0.00 8.733±0.00 29.252±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004R4 CIL_0004R4_0003 CGP 11:133908564-134152001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IDA angiogenesis
GO:0005178 IPI integrin binding
GO:0005515 IPI:IEA protein binding
GO:0005615 IDA extracellular space
GO:0005886 TAS plasma membrane
GO:0007596 TAS blood coagulation
GO:0016021 IEA integral component of membrane
GO:0030057 IDA desmosome
GO:0030198 TAS extracellular matrix organization
GO:0044291 IDA cell-cell contact zone
GO:0050900 TAS leukocyte migration
GO:0090022 IDA regulation of neutrophil chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034472 Jam3-201 protein_coding Mus_musculus 0 556
ENSMUST00000167074 Jam3-001 protein_coding Mus_musculus 0 329

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