C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming growth factor, beta-induced, 68kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442011 TGFBI-001 ENSG00000120708 9606 + 5:136028895-136063817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000442011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000442011 66.330±0.00 32.437±0.00 2.114±0.00 1.611±1.23 30.224±8.47 13.399±6.43 13.883±8.25 11.957±2.27 18.198±4.24 32.209±19.20 11.255±7.69 32.148±19.76 159.321±54.36 11.661±11.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XY CIL_0005XY_0001 CGP 5:135922279-136063818
CIL_0005P2 CIL_0005P2_0001 CGP 5:136028895-136188747

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEP angiogenesis
GO:0002062 IEA chondrocyte differentiation
GO:0005178 TAS integrin binding
GO:0005515 IPI:IEA protein binding
GO:0005518 IPI collagen binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005604 IEA basement membrane
GO:0005615 IDA extracellular space
GO:0005802 IDA trans-Golgi network
GO:0005886 TAS plasma membrane
GO:0007155 IEA cell adhesion
GO:0007162 TAS negative regulation of cell adhesion
GO:0007601 IEA visual perception
GO:0008283 TAS cell proliferation
GO:0030198 IEA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0050840 IEA extracellular matrix binding
GO:0050896 IEA response to stimulus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045173 Tgfbi-201 protein_coding Mus_musculus 0 2523

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