C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005P2_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000120708-ENSG00000113658 | CGP | 9606 | 5:136028895-136188747  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000113658  (SMAD5)SMAD family member 5 |
ENST00000506223 (SMAD5-008)
|
136133823-136154002 | protein_coding | |
|
ENST00000507118 (SMAD5-002)
|
136132847-136154144 | protein_coding | ||
|
ENST00000507245 (SMAD5-009)
|
136147420-136153681 | retained_intron | ||
|
ENST00000507637 (SMAD5-010)
|
136160986-136172829 | protein_coding | ||
|
ENST00000509297 (SMAD5-004)
|
136133353-136153763 | protein_coding | ||
|
ENST00000509962 (SMAD5-007)
|
136133224-136153729 | processed_transcript | ||
|
ENST00000511116 (SMAD5-003)
|
136132847-136154163 | protein_coding | ||
|
ENST00000513418 (SMAD5-012)
|
136174469-136188747 | nonsense_mediated_decay | ||
|
ENST00000514777 (SMAD5-011)
|
136132904-136177386 | processed_transcript | ||
|
ENST00000515005 (SMAD5-005)
|
136133353-136153763 | protein_coding | ||
|
ENST00000545279 (SMAD5-001)
|
136132845-136182732 | protein_coding | ||
|
ENST00000545620 (SMAD5-201)
|
136132847-136182734 | protein_coding | ||
|
ENSG00000120708 (TGFBI) transforming growth factor, beta-induced, 68kDa |
ENST00000442011 (TGFBI-001)
|
136028895-136063817 | protein_coding | |
|
ENST00000503087 (TGFBI-017)
|
136059186-136063372 | protein_coding | ||
|
ENST00000504185 (TGFBI-010)
|
136028988-136046440 | processed_transcript | ||
|
ENST00000504411 (TGFBI-018)
|
136061190-136063803 | retained_intron | ||
|
ENST00000506699 (TGFBI-007)
|
136028991-136063816 | retained_intron | ||
|
ENST00000507018 (TGFBI-003)
|
136029139-136063665 | nonsense_mediated_decay | ||
|
ENST00000508076 (TGFBI-016)
|
136058849-136063815 | protein_coding | ||
|
ENST00000508767 (TGFBI-012)
|
136047324-136054818 | protein_coding | ||
|
ENST00000509485 (TGFBI-013)
|
136053943-136059145 | nonsense_mediated_decay | ||
|
ENST00000509749 (TGFBI-011)
|
136047353-136049807 | retained_intron | ||
|
ENST00000513497 (TGFBI-015)
|
136058767-136061536 | retained_intron | ||
|
ENST00000514242 (TGFBI-014)
|
136055499-136059214 | retained_intron | ||
|
ENST00000514554 (TGFBI-008)
|
136049516-136063818 | protein_coding | ||
|
ENST00000515433 (TGFBI-009)
|
136045745-136055189 | retained_intron | ||
|
ENST00000604555 (TGFBI-019)
|
136047418-136055392 | protein_coding | ||
|
ENSG00000270123 (VTRNA2-1) vault RNA 2-1 |
ENST00000602301 (VTRNA2-1-001)
|
136080471-136080597 | lincRNA | |
|
ENSG00000278815 (Vault) Vault RNA |
ENST00000365160 (Vault.1-204)
|
136080497-136080597 | misc_RNA | |
| CIL_0005P2_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000035493-ENSMUSG00000021540 | CGP | 10090 | 13:56609603-56742377 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000021540 (Smad5) SMAD family member 5 |
ENSMUST00000069557 (Smad5-001)
|
56703010-56742377 | protein_coding | |
|
ENSMUST00000109874 (Smad5-003)
|
56703668-56740304 | protein_coding | ||
|
ENSMUST00000109876 (Smad5-002)
|
56703052-56739960 | protein_coding | ||
|
ENSMUST00000132302 (Smad5-005)
|
56703066-56733125 | processed_transcript | ||
|
ENSMUST00000136702 (Smad5-006)
|
56733017-56738993 | processed_transcript | ||
|
ENSMUST00000138677 (Smad5-004)
|
56703039-56733214 | processed_transcript | ||
|
ENSMUSG00000035493 (Tgfbi) transforming growth factor, beta induced |
ENSMUST00000045173 (Tgfbi-201)
|
56609603-56639339 | protein_coding | |
|
ENSMUSG00000098328 (Gm27271) predicted gene, 27271 |
ENSMUST00000183509 (Gm27271-201)
|
56704030-56704199 | misc_RNA | |
|
ENSMUSG00000098732 (Gm27834) predicted gene, 27834 |
ENSMUST00000183427 (Gm27834-201)
|
56703881-56704005 | misc_RNA | |
Expression Patterns
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