C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442824 RP11-274E7.2-001 ENSG00000238000 9606 + 5:98213402-98214121 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000442824
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000442824 0.509±0.00 2.549±0.00 0.206±0.00 0.849±0.00 1.276±0.00 0.728±0.00 1.329±0.00 0.979±0.00 1.627±0.00 0.637±0.00 0.109±0.00 0.410±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000104958 Psme2b-001 protein_coding Mus_musculus 0 893
ENSMUST00000161807 Psme2-001 protein_coding Mus_musculus 0 881
ENSMUST00000111378 Psme2-201 protein_coding Mus_musculus 0 822
ENSMUST00000181249 Gm7928-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000159687 Psme2-002 protein_coding Mus_musculus 0 549
ENSMUST00000161027 Psme2-007 retained_intron Mus_musculus 0 520
ENSMUST00000161573 Psme2-008 retained_intron Mus_musculus 0 490
ENSMUST00000162700 Psme2-009 retained_intron Mus_musculus 0 366
ENSMUST00000159282 Psme2-006 retained_intron Mus_musculus 0 335
ENSMUST00000162496 Psme2-003 retained_intron Mus_musculus 2e-18 97
ENSMUST00000159845 Psme2-004 retained_intron Mus_musculus 0.0000000001 71

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