C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161807 Psme2-001 ENSMUSG00000079197 10090 - 14:55587441-55591087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161807 50.475±4.37 25.911±2.17 63.612±1.48 19.298±1.14 37.160±7.03 27.458±2.76 13.698±1.60 22.927±2.36 38.928±12.71 21.429±2.69 16.533±2.89 14.521±5.84 34.506±10.38 3.707±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0003 CGP 14:55581516-55591113
CIL_00031B CIL_00031B_0002 CGP 14:55587441-55603693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008537 IEA proteasome activator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216802 PSME2-001 protein_coding Homo_sapiens 0 1064
ENST00000426373 RP11-108B14.4-001 processed_pseudogene Homo_sapiens 0 438
ENST00000442824 RP11-274E7.2-001 processed_pseudogene Homo_sapiens 0 881
ENST00000453033 PSME2P2-001 processed_pseudogene Homo_sapiens 0 806
ENST00000471700 PSME2-003 processed_transcript Homo_sapiens 0 616
ENST00000503348 RP11-815N9.2-001 processed_pseudogene Homo_sapiens 0 767
ENST00000505310 RP11-177C12.4-001 processed_pseudogene Homo_sapiens 0 664
ENST00000558273 PSME2-004 nonsense_mediated_decay Homo_sapiens 0 857
ENST00000558931 PSME2-005 retained_intron Homo_sapiens 0 545
ENST00000559005 PSME2-007 retained_intron Homo_sapiens 0 300
ENST00000559042 PSME2-008 retained_intron Homo_sapiens 3e-36 156
ENST00000559056 PSME2-015 protein_coding Homo_sapiens 0 547
ENST00000559359 PSME2-009 retained_intron Homo_sapiens 0 209
ENST00000559453 PSME2-006 retained_intron Homo_sapiens 0 568
ENST00000559493 PSME2-010 retained_intron Homo_sapiens 3e-22 110
ENST00000560370 PSME2-014 nonsense_mediated_decay Homo_sapiens 0 719
ENST00000560410 PSME2-013 protein_coding Homo_sapiens 0 885
ENST00000615264 PSME2-201 protein_coding Homo_sapiens 0 673

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