C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161573 Psme2-008 ENSMUSG00000079197 10090 - 14:55587447-55588604 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000161573
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000161573 16.279±0.00 9.631±0.00 34.149±22.96 41.388±6.94 2.161±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0003 CGP 14:55581516-55591113
CIL_00031B CIL_00031B_0002 CGP 14:55587441-55603693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216802 PSME2-001 protein_coding Homo_sapiens 0 573
ENST00000426373 RP11-108B14.4-001 processed_pseudogene Homo_sapiens 0 438
ENST00000442824 RP11-274E7.2-001 processed_pseudogene Homo_sapiens 0 490
ENST00000453033 PSME2P2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000471700 PSME2-003 processed_transcript Homo_sapiens 0 302
ENST00000503348 RP11-815N9.2-001 processed_pseudogene Homo_sapiens 0 442
ENST00000505310 RP11-177C12.4-001 processed_pseudogene Homo_sapiens 0 416
ENST00000558273 PSME2-004 nonsense_mediated_decay Homo_sapiens 0 545
ENST00000558931 PSME2-005 retained_intron Homo_sapiens 0 556
ENST00000559005 PSME2-007 retained_intron Homo_sapiens 0 300
ENST00000559042 PSME2-008 retained_intron Homo_sapiens 3e-36 156
ENST00000559359 PSME2-009 retained_intron Homo_sapiens 0 220
ENST00000559453 PSME2-006 retained_intron Homo_sapiens 0 579
ENST00000560370 PSME2-014 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000560410 PSME2-013 protein_coding Homo_sapiens 0 573
ENST00000615264 PSME2-201 protein_coding Homo_sapiens 0 573

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