C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159845 Psme2-004 ENSMUSG00000079197 10090 - 14:55589317-55590948 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000159845
Transcript ID Testis
ENSMUST00000159845 1.224±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0003 CGP 14:55581516-55591113
CIL_00031B CIL_00031B_0002 CGP 14:55587441-55603693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216802 PSME2-001 protein_coding Homo_sapiens 0.000000000001 79
ENST00000442824 RP11-274E7.2-001 processed_pseudogene Homo_sapiens 0.0000000001 71
ENST00000471700 PSME2-003 processed_transcript Homo_sapiens 0.0000000000007 79
ENST00000558273 PSME2-004 nonsense_mediated_decay Homo_sapiens 0.000000000002 79
ENST00000558931 PSME2-005 retained_intron Homo_sapiens 2e-19 102
ENST00000559056 PSME2-015 protein_coding Homo_sapiens 0.0000000000005 79
ENST00000559453 PSME2-006 retained_intron Homo_sapiens 0.000000000002 79
ENST00000559493 PSME2-010 retained_intron Homo_sapiens 4e-20 102
ENST00000560370 PSME2-014 nonsense_mediated_decay Homo_sapiens 0.0000000000006 79
ENST00000560410 PSME2-013 protein_coding Homo_sapiens 0.0000000000008 79
ENST00000615264 PSME2-201 protein_coding Homo_sapiens 0.000000000000006 86

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