C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capicua transcriptional repressor pseudogene 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443330 CICP20-001 ENSG00000235955 9606 - 7:45816216-45819016 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryPlacentaTestisENST00000443330
Transcript ID Breast Colon Lung Ovary Placenta Testis
ENST00000443330 0.010±0.00 0.017±0.00 0.031±0.00 0.011±0.00 0.026±0.00 0.107±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WT CIL_0008WT_0001 VISTA 7:45262733-45867007
CIL_00072L CIL_00072L_0002 CGP 7:45574140-45893668

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005578 Cic-201 protein_coding Mus_musculus 0 1074
ENSMUST00000165239 Cic-015 protein_coding Mus_musculus 0 1074
ENSMUST00000163320 Cic-002 protein_coding Mus_musculus 0 1074
ENSMUST00000169266 Cic-001 protein_coding Mus_musculus 0 1046
ENSMUST00000167379 Cic-004 retained_intron Mus_musculus 0 662

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