C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443358 PUS1-002 ENSG00000177192 9606 + 12:131929200-131943859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000443358
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000443358 2.195±0.00 7.901±0.00 2.391±0.00 3.013±0.00 1.756±0.86 1.273±0.00 4.871±0.00 7.198±0.00 2.032±0.00 7.066±0.00 6.802±3.44 5.456±1.88 5.110±0.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0004730 NAS pseudouridylate synthase activity
GO:0005739 IEA mitochondrion
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170468 Pus1-201 protein_coding Mus_musculus 0 1136
ENSMUST00000031481 Pus1-003 protein_coding Mus_musculus 0 1136
ENSMUST00000031483 Pus1-001 protein_coding Mus_musculus 0 1136
ENSMUST00000112426 Pus1-004 protein_coding Mus_musculus 0 935
ENSMUST00000086643 Pus1-002 protein_coding Mus_musculus 0 933
ENSMUST00000136483 Pus1-005 protein_coding Mus_musculus 0 346
ENSMUST00000149208 Pus1-006 protein_coding Mus_musculus 0 206

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