C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S7 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443360 RPS7P3-001 ENSG00000231940 9606 - 1:233288868-233289447 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000443360
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000443360 0.102±0.00 0.107±0.00 0.049±0.02 0.135±0.00 0.325±0.00 0.024±0.00 0.027±0.00 0.048±0.00 0.141±0.09 0.071±0.00 0.437±0.11 0.124±0.02 0.061±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OO CIL_0001OO_0001 CGP 1:232950605-233295713
CIL_0006KA CIL_0006KA_0001 CGP 1:232983435-233385148

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074267 Rps7-201 protein_coding Mus_musculus 0 675
ENSMUST00000187973 Gm6472-001 transcribed_processed_pseudogene Mus_musculus 0 658
ENSMUST00000178147 Gm6472-002 processed_transcript Mus_musculus 0 658
ENSMUST00000104916 Gm9493-201 protein_coding Mus_musculus 0 643
ENSMUST00000190473 RP23-300D5.1-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000119317 Gm8019-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000116438 Gm7091-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000178086 Gm4761-201 processed_pseudogene Mus_musculus 0 514
ENSMUST00000120919 Gm12900-001 processed_pseudogene Mus_musculus 0 490

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