C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9493
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000104916 Gm9493-201 ENSMUSG00000044424 10090 + 19:23619742-23620320 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000104916
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000104916 0.610±0.02 0.312±0.14 6.577±2.80 4.728±0.09 0.273±0.06 1.065±0.50 0.799±0.57 1.462±0.76 5.553±5.81 0.379±0.19 0.447±0.15 0.303±0.16 0.596±0.55 1.566±0.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002181 IBA cytoplasmic translation
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0006364 IBA rRNA processing
GO:0022627 IBA cytosolic small ribosomal subunit
GO:0030686 IBA 90S preribosome
GO:0032040 IBA small-subunit processome
GO:0042274 IBA ribosomal small subunit biogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304921 RPS7-001 protein_coding Homo_sapiens 0 734
ENST00000403564 RPS7-008 protein_coding Homo_sapiens 0 734
ENST00000406376 RPS7-009 protein_coding Homo_sapiens 0 734
ENST00000407445 RPS7-005 protein_coding Homo_sapiens 0 616
ENST00000415804 RPS7P15-001 processed_pseudogene Homo_sapiens 0 534
ENST00000418311 RPS7P8-001 processed_pseudogene Homo_sapiens 0 610
ENST00000426405 RPS7P14-001 processed_pseudogene Homo_sapiens 0 614
ENST00000443360 RPS7P3-001 processed_pseudogene Homo_sapiens 0 643
ENST00000444127 RPS7P4-001 processed_pseudogene Homo_sapiens 0 654
ENST00000462576 RPS7-006 retained_intron Homo_sapiens 0 734
ENST00000463499 RPS7P7-001 processed_pseudogene Homo_sapiens 0 479
ENST00000464254 RPS7P10-001 processed_pseudogene Homo_sapiens 0 699
ENST00000472966 RPS7-004 retained_intron Homo_sapiens 0 322
ENST00000479123 RPS7-003 retained_intron Homo_sapiens 0 329
ENST00000481006 RPS7-002 retained_intron Homo_sapiens 0 198
ENST00000484240 RPS7P11-001 processed_pseudogene Homo_sapiens 0 706
ENST00000485777 RPS7P6-001 processed_pseudogene Homo_sapiens 0 507
ENST00000491937 RPS7-007 retained_intron Homo_sapiens 0 616
ENST00000571702 RPS7P1-001 processed_pseudogene Homo_sapiens 0 706
ENST00000573941 RP11-164N20.2-001 processed_pseudogene Homo_sapiens 0 187
ENST00000588553 AC005786.3-001 processed_pseudogene Homo_sapiens 0 206

Loading