C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006KA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135749-ENSG00000143674 CGP 9606 1:232983435-233385148
GeneTranscriptPositionBiotype
ENSG00000135749 (PCNXL2)
pecanex-like 2 (Drosophila)
ENST00000258229 (PCNXL2-002) 232983435-233295713 protein_coding
ENST00000324142 (PCNXL2-003) 233201492-233252687 retained_intron
ENST00000344698 (PCNXL2-001) 232984136-233058518 protein_coding
ENST00000429988 (PCNXL2-023) 233025263-233054689 retained_intron
ENST00000430153 (PCNXL2-201) 233135013-233258152 protein_coding
ENST00000462233 (PCNXL2-007) 232984136-233200191 nonsense_mediated_decay
ENST00000462762 (PCNXL2-016) 232984137-232985552 processed_transcript
ENST00000467336 (PCNXL2-008) 233139809-233180996 processed_transcript
ENST00000475463 (PCNXL2-005) 233065461-233258152 nonsense_mediated_decay
ENST00000484041 (PCNXL2-013) 233089851-233135188 retained_intron
ENST00000484347 (PCNXL2-011) 233095406-233160307 protein_coding
ENST00000486012 (PCNXL2-012) 233095657-233177835 nonsense_mediated_decay
ENST00000488780 (PCNXL2-010) 233134784-233218087 protein_coding
ENST00000490102 (PCNXL2-022) 233090162-233139836 nonsense_mediated_decay
ENST00000496510 (PCNXL2-020) 233139826-233181102 processed_transcript
ENST00000496675 (PCNXL2-015) 232984135-232985884 processed_transcript
ENST00000497623 (PCNXL2-014) 232998323-232999627 retained_intron
ENST00000498302 (PCNXL2-009) 233160247-233179174 retained_intron
ENST00000517808 (PCNXL2-018) 233199020-233218089 nonsense_mediated_decay
ENST00000518351 (PCNXL2-019) 233198967-233227269 protein_coding
ENST00000519530 (PCNXL2-017) 233208659-233227347 retained_intron
ENST00000520463 (PCNXL2-021) 233125904-233160425 processed_transcript
ENST00000522067 (PCNXL2-024) 233017073-233025632 retained_intron
ENSG00000143674 (MLK4)
Mitogen-activated protein kinase kinase kinase MLK4
ENST00000366622 (MLK4-003) 233375783-233385147 protein_coding
ENST00000366623 (MLK4-002) 233327768-233374134 protein_coding
ENST00000366624 (MLK4-001) 233327768-233385148 protein_coding
ENSG00000231940 (RPS7P3)
ribosomal protein S7 pseudogene 3
ENST00000443360 (RPS7P3-001) 233288868-233289447 processed_pseudogene
CIL_0006KA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060212-ENSMUSG00000031853 CGP 10090 8:125751508-125947439
GeneTranscriptPositionBiotype
ENSMUSG00000031853 (BC021891)
cDNA sequence BC021891
ENSMUST00000034316 (BC021891-201) 125910450-125947439 protein_coding
ENSMUSG00000060212 (Pcnxl2)
pecanex-like 2 (Drosophila)
ENSMUST00000047239 (Pcnxl2-002) 125751508-125898317 protein_coding
ENSMUST00000119305 (Pcnxl2-004) 125751511-125774128 retained_intron
ENSMUST00000120589 (Pcnxl2-003) 125751509-125839850 retained_intron
ENSMUST00000131127 (Pcnxl2-001) 125837607-125898317 protein_coding
ENSMUST00000187772 (Pcnxl2-007) 125861191-125898275 processed_transcript
ENSMUST00000189197 (Pcnxl2-006) 125827163-125829033 retained_intron
ENSMUSG00000100812 (RP23-158A22.1)
RIKEN cDNA A730098A19 gene
ENSMUST00000188193 (RP23-158A22.1-001) 125897914-125908144 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KA_0001ENSG00000135749ENST00000258229ENST00000324142ENST00000344698ENST00000429988ENST00000430153ENST00000462233ENST00000462762ENST00000467336ENST00000475463ENST00000484041ENST00000484347ENST00000486012ENST00000488780ENST00000490102ENST00000496510ENST00000496675ENST00000497623ENST00000498302ENST00000517808ENST00000518351ENST00000519530ENST00000520463ENST00000522067ENSG00000143674ENST00000366622ENST00000366623ENST00000366624ENSG00000231940ENST00000443360CIL_0006KA_0002ENSMUSG00000031853ENSMUST00000034316ENSMUSG00000060212ENSMUST00000047239ENSMUST00000119305ENSMUST00000120589ENSMUST00000131127ENSMUST00000187772ENSMUST00000189197ENSMUSG00000100812ENSMUST00000188193
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KA_0001ENSG00000135749ENST00000258229ENST00000344698ENSG00000143674ENST00000366622ENST00000366623ENST00000366624ENSG00000231940ENST00000443360CIL_0006KA_0002ENSMUSG00000031853ENSMUST00000034316ENSMUSG00000060212ENSMUST00000047239ENSMUST00000119305ENSMUST00000120589ENSMUST00000131127ENSMUST00000189197ENSMUSG00000100812ENSMUST00000188193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135749 ENST00000258229 0.901±0.00 1.393±0.00 0.664±0.00 5.176±2.12 1.082±0.00 1.100±0.00 N/A 1.138±0.00 N/A 0.941±0.00 N/A 3.146±1.18 N/A 1.523±0.00
ENST00000324142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000344698 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00 N/A N/A N/A N/A
ENST00000429988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143674 ENST00000366622 N/A 0.222±0.00 N/A N/A 0.215±0.12 0.292±0.00 N/A 1.795±0.00 0.293±0.00 N/A N/A 0.635±0.31 0.043±0.00 1.245±0.00
ENST00000366623 N/A 0.068±0.00 0.687±0.00 N/A N/A N/A 0.021±0.00 0.129±0.00 0.126±0.00 0.520±0.00 N/A 0.521±0.00 N/A 0.695±0.00
ENST00000366624 0.149±0.00 N/A 1.840±0.00 0.682±0.09 0.695±0.28 0.958±0.64 0.054±0.03 2.112±1.72 0.187±0.06 0.732±0.26 N/A 0.825±0.82 0.117±0.07 1.620±0.55
ENSG00000231940 ENST00000443360 0.102±0.00 0.107±0.00 N/A 0.049±0.02 0.135±0.00 0.325±0.00 0.024±0.00 0.027±0.00 0.048±0.00 0.141±0.09 0.071±0.00 0.437±0.11 0.124±0.02 0.061±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031853 ENSMUST00000034316 1.159±1.11 0.621±0.28 0.087±0.00 0.314±0.12 0.682±0.18 8.165±1.43 0.168±0.10 2.150±0.17 0.824±0.62 0.579±0.29 0.019±0.01 1.534±0.66 1.786±1.77 1.331±0.45
ENSMUSG00000060212 ENSMUST00000047239 N/A 0.044±0.00 N/A 5.370±3.05 N/A 0.081±0.03 0.018±0.00 0.024±0.01 0.021±0.01 N/A N/A N/A N/A N/A
ENSMUST00000119305 0.285±0.16 0.107±0.01 0.333±0.15 13.391±0.00 0.100±0.02 0.130±0.06 0.104±0.07 0.071±0.03 0.034±0.02 0.378±0.00 0.177±0.08 1.667±0.36 0.212±0.24 2.531±0.94
ENSMUST00000120589 0.540±0.61 0.153±0.03 0.400±0.29 1.334±0.43 N/A 0.082±0.03 0.145±0.04 0.051±0.05 0.023±0.01 0.120±0.00 0.124±0.02 2.783±1.45 0.123±0.07 0.083±0.00
ENSMUST00000131127 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A 0.009±0.00 N/A N/A N/A 0.010±0.00 N/A
ENSMUST00000187772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189197 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000100812 ENSMUST00000188193 N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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