C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443891 CTDSP1-002 ENSG00000144579 9606 + 2:218398338-218404676 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VF CIL_0005VF_0001 CGP 2:218382029-218405941
CIL_000650 CIL_000650_0001 CGP 2:218398256-218453295

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 TAS nucleus
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006470 IDA protein dephosphorylation
GO:0008420 IDA CTD phosphatase activity
GO:0016791 IEA phosphatase activity
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027367 Ctdsp1-001 protein_coding Mus_musculus 0 1022
ENSMUST00000141175 Ctdsp1-002 retained_intron Mus_musculus 0 819
ENSMUST00000152659 Ctdsp1-003 protein_coding Mus_musculus 0 440

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