C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005VF_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000018280-ENSG00000144579 | CGP | 9606 | 2:218382029-218405941  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000018280  (SLC11A1)solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 |
ENST00000233202 (SLC11A1-001)
|
218382029-218396894 | protein_coding | |
|
ENST00000354352 (SLC11A1-003)
|
218382248-218395323 | nonsense_mediated_decay | ||
|
ENST00000460592 (SLC11A1-018)
|
218385155-218385574 | retained_intron | ||
|
ENST00000465984 (SLC11A1-004)
|
218382188-218396026 | retained_intron | ||
|
ENST00000468221 (SLC11A1-009)
|
218382029-218396027 | retained_intron | ||
|
ENST00000468721 (SLC11A1-005)
|
218392840-218394186 | retained_intron | ||
|
ENST00000469449 (SLC11A1-011)
|
218383687-218388385 | retained_intron | ||
|
ENST00000469799 (SLC11A1-016)
|
218382279-218387112 | retained_intron | ||
|
ENST00000471875 (SLC11A1-015)
|
218382279-218386772 | retained_intron | ||
|
ENST00000473367 (SLC11A1-013)
|
218382169-218386667 | nonsense_mediated_decay | ||
|
ENST00000475225 (SLC11A1-002)
|
218382302-218388385 | retained_intron | ||
|
ENST00000481524 (SLC11A1-014)
|
218382273-218387584 | nonsense_mediated_decay | ||
|
ENST00000483487 (SLC11A1-017)
|
218384167-218386813 | retained_intron | ||
|
ENST00000490536 (SLC11A1-012)
|
218392590-218394635 | retained_intron | ||
|
ENST00000490872 (SLC11A1-019)
|
218389965-218391771 | retained_intron | ||
|
ENST00000492413 (SLC11A1-006)
|
218382287-218387134 | retained_intron | ||
|
ENST00000494322 (SLC11A1-010)
|
218382273-218392635 | retained_intron | ||
|
ENST00000539932 (SLC11A1-007)
|
218382203-218392692 | nonsense_mediated_decay | ||
|
ENSG00000144579 (CTDSP1) CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
ENST00000273062 (CTDSP1-001)
|
218399755-218405941 | protein_coding | |
|
ENST00000428361 (CTDSP1-011)
|
218400308-218404479 | protein_coding | ||
|
ENST00000431127 (CTDSP1-008)
|
218400678-218402407 | protein_coding | ||
|
ENST00000443891 (CTDSP1-002)
|
218398338-218404676 | protein_coding | ||
|
ENST00000452977 (CTDSP1-012)
|
218400134-218404479 | protein_coding | ||
|
ENST00000464255 (CTDSP1-015)
|
218401168-218404587 | processed_transcript | ||
|
ENST00000473420 (CTDSP1-004)
|
218398778-218403400 | processed_transcript | ||
|
ENST00000482272 (CTDSP1-010)
|
218401167-218403417 | retained_intron | ||
|
ENST00000488627 (CTDSP1-009)
|
218401062-218404773 | processed_transcript | ||
|
ENST00000491064 (CTDSP1-014)
|
218398256-218404418 | processed_transcript | ||
|
ENST00000492545 (CTDSP1-003)
|
218398703-218400070 | processed_transcript | ||
|
ENST00000494067 (CTDSP1-013)
|
218400133-218402431 | retained_intron | ||
|
ENST00000496785 (CTDSP1-007)
|
218400587-218401712 | processed_transcript | ||
|
ENST00000497677 (CTDSP1-006)
|
218400071-218403741 | retained_intron | ||
|
ENST00000498160 (CTDSP1-005)
|
218398974-218403415 | processed_transcript | ||
| CIL_0005VF_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000026177-ENSMUSG00000026176 | CGP | 10090 | 1:74375195-74397285 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026176 (Ctdsp1) CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 |
ENSMUST00000027367 (Ctdsp1-001)
|
74391509-74397285 | protein_coding | |
|
ENSMUST00000141175 (Ctdsp1-002)
|
74391795-74397282 | retained_intron | ||
|
ENSMUST00000152659 (Ctdsp1-003)
|
74392162-74394069 | protein_coding | ||
|
ENSMUSG00000026177 (Slc11a1) solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 |
ENSMUST00000027368 (Slc11a1-001)
|
74375203-74386062 | protein_coding | |
|
ENSMUST00000127487 (Slc11a1-008)
|
74383034-74383834 | retained_intron | ||
|
ENSMUST00000131511 (Slc11a1-003)
|
74375225-74386051 | retained_intron | ||
|
ENSMUST00000133896 (Slc11a1-007)
|
74381651-74384173 | retained_intron | ||
|
ENSMUST00000134189 (Slc11a1-010)
|
74383600-74385197 | processed_transcript | ||
|
ENSMUST00000135137 (Slc11a1-005)
|
74375572-74376890 | processed_transcript | ||
|
ENSMUST00000136786 (Slc11a1-004)
|
74375253-74381826 | processed_transcript | ||
|
ENSMUST00000147233 (Slc11a1-002)
|
74375203-74386052 | retained_intron | ||
|
ENSMUST00000149166 (Slc11a1-009)
|
74383341-74384173 | processed_transcript | ||
|
ENSMUST00000155865 (Slc11a1-006)
|
74376657-74379856 | processed_transcript | ||
|
ENSMUST00000187516 (Slc11a1-011)
|
74375195-74385755 | protein_coding | ||
|
ENSMUSG00000065468 (Mir26b) microRNA 26b |
ENSMUST00000083534 (Mir26b-201)
|
74394310-74394394 | miRNA | |
Expression Patterns
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