C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO-interacting motifs containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443967 SIMC1-001 ENSG00000170085 9606 + 5:176238367-176345991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLungMuscleOvaryPlacentaENST00000443967
Transcript ID Adipose Adrenal Brain Heart Kidney Lung Muscle Ovary Placenta
ENST00000443967 0.630±0.00 1.412±0.00 1.202±0.00 0.544±0.00 0.372±0.00 0.707±0.00 0.669±0.00 2.782±2.11 0.768±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DK CIL_0002DK_0001 CGP 5:176238367-176361968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0032184 IDA SUMO polymer binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121401 Simc1-001 protein_coding Mus_musculus 0 1792
ENSMUST00000118072 Simc1-002 protein_coding Mus_musculus 0 1559
ENSMUST00000126506 Simc1-007 retained_intron Mus_musculus 0 558
ENSMUST00000150011 Simc1-006 retained_intron Mus_musculus 0 385
ENSMUST00000138869 Simc1-003 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000123852 Simc1-005 processed_transcript Mus_musculus 0 294

Loading