C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear speckle splicing regulatory protein 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444067 NSRP1P1-001 ENSG00000235613 9606 + 1:77847110-77848802 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444067
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444067 0.075±0.00 0.225±0.00 0.029±0.00 0.093±0.08 0.034±0.01 0.168±0.04 0.043±0.01 0.279±0.00 0.100±0.00 0.161±0.00 0.192±0.00 0.137±0.11 0.645±0.00 0.316±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0001 VISTA 1:77533579-78136618
CIL_0007KB CIL_0007KB_0001 UCNEbase 1:77564480-77948632

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102494 Ccdc55-001 protein_coding Mus_musculus 0 876
ENSMUST00000127758 Ccdc55-002 protein_coding Mus_musculus 0 265
ENSMUST00000134685 Ccdc55-003 processed_transcript Mus_musculus 0 209

Loading