C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444423 RP11-543E8.2-001 ENSG00000235817 9606 - 1:230612009-230612412 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalKidneyLiverLungMuscleTestisENST00000444423
Transcript ID Adipose Adrenal Kidney Liver Lung Muscle Testis
ENST00000444423 0.054±0.00 0.110±0.00 0.266±0.00 0.024±0.00 0.073±0.00 0.121±0.00 0.080±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060Z CIL_00060Z_0001 CGP 1:230314482-230693982
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169826 Rps24-202 protein_coding Mus_musculus 0 381
ENSMUST00000118723 Rps24-ps3-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000184151 RP23-85E24.2-001 transcribed_processed_pseudogene Mus_musculus 0 364
ENSMUST00000078768 Gm6030-201 processed_pseudogene Mus_musculus 0 364
ENSMUST00000112384 Rps24-201 protein_coding Mus_musculus 0 364
ENSMUST00000162574 AC122223.2-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000117908 Gm11878-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000119883 Gm7363-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000091375 Rps24-ps2-201 processed_pseudogene Mus_musculus 0 272

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